Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90697g00004 ATGCAACCAGAGCATTACTTCCAGGAGAAGTTCATGTTCCCCGTTTCCGTCGACGAAGATGACAAAGCCACCGAGTTCCGTCCGTTATCGGCAGCACGGCCACACATGCTTGCGTTCCACCTGGCATGGCTGAACCTCTTCTCCTGCTTCTTCTCCACCTTTTCCATCCCCCCGCTCCTCCCCATCATCCGTGAAGACCTCAAACTCACCGCCGCCGACATAGGTGCCGCTGGCACCGCCTCCTTTGCCGGCTCCATCTTCTCCCGCCTCCTCATGGGACCCACCTGTGACCTCGTCGGCCCCCGCATAGCCTCTGGCACGCTCTCCCTCCTCACCGCCCCAATCATCCTCGCCACTTCACTAGTCTCCACACCCACCTCCTTCATCGTCATCCGCTTCCTGGTCGGCTTCTGCCTCGCCAACTTCGTATCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCGGGAACGTTGTTGGCCTTGCCAACGGCGTTGTCGCAGGCTGGGCCAACGTTGGCTCTGGCGTGACCCAACTCGTCATGCCCGTCGTCTACTCCCTCTTCATCTCACTCTTCAACCTCTCTTCCTCCACCGCATGGCGCTTATCATTCATAATCCCGGCAATCTTCCAAGCCACCACTGGAACCTTGGTTTTGTTATACGGTCAAGATCTTCCTTCTAGTTATAACCACAACACCAAGAAAGGTACTAATAATCCAAAGGAGAGTGTTTCTGTTGTTGTGTTCCGTGGGTTATCGAATTACAGAGGATGGATTCTGGGGTTGCTCTATGCGGCGTCGTTTGGGGTGGAGCTTACGATGGACAACATAATAGCGGAGTATTTCTATGACAGGTTCGGGGTGAATGTTCAGACGGCGGGGACCATTGCGGCATGTTTTGGGATGGCGAATCTGTTTTCGAGGCCAATGGGGGGAGTGATGTCTGACAGGATGGGCAAGAGGTTCGGGATGAGAGGGAGGCTTTGGGGGCTGTGGGCGGTTCAGACGGTAGCGGGTTTGTTTTGTGTGTTGCTCGGTCGAGTTAACTCGCTTTGGAGCTCGGTGCTTGTCATGTGCTGCTTTTCTGTGTTTGTTCAAGCTGCTTCGGGCCTCAACTTTGGCGTCGTTCCTTTCGTTTCAAAGAGATCGTTAGGAGTAATAGCAGGAATGACTGGAAGCGGTGGAACGATAGGAGCAGTTGTGACGCAAATGCTGCTCTTCTCAGGCGGCAGCTTACCTACTCAAACAAGCATATCCCTGATGGGCCTACTCATCATATTTTGTACTCTTCCTGTAACTTTGATATACTTCTCTCGTTCCGGAGGAATGTTTTGTGGTCCTGCCTCATGTCATGATCCAATCGAAGAAAATTATAGCCTACTAGAATAA 1386 0.5296 MQPEHYFQEKFMFPVSVDEDDKATEFRPLSAARPHMLAFHLAWLNLFSCFFSTFSIPPLLPIIREDLKLTAADIGAAGTASFAGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPIILATSLVSTPTSFIVIRFLVGFCLANFVSSQFWMSSMFSGNVVGLANGVVAGWANVGSGVTQLVMPVVYSLFISLFNLSSSTAWRLSFIIPAIFQATTGTLVLLYGQDLPSSYNHNTKKGTNNPKESVSVVVFRGLSNYRGWILGLLYAASFGVELTMDNIIAEYFYDRFGVNVQTAGTIAACFGMANLFSRPMGGVMSDRMGKRFGMRGRLWGLWAVQTVAGLFCVLLGRVNSLWSSVLVMCCFSVFVQAASGLNFGVVPFVSKRSLGVIAGMTGSGGTIGAVVTQMLLFSGGSLPTQTSISLMGLLIIFCTLPVTLIYFSRSGGMFCGPASCHDPIEENYSLLE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90697g00004 461 FunFam Probable high-affinity nitrate transporter 2.4 31 227 - -
Stsc90697g00004 461 Pfam Major Facilitator Superfamily 43 400 IPR011701 GO:0022857|GO:0055085
Stsc90697g00004 461 Gene3D MFS general substrate transporter like domains 242 443 IPR036259 -
Stsc90697g00004 461 CDD MFS_NRT2_like 39 433 IPR044772 GO:0015112
Stsc90697g00004 461 FunFam Nitrate transporter 2.1 240 441 - -
Stsc90697g00004 461 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 433 IPR020846 GO:0022857
Stsc90697g00004 461 SUPERFAMILY MFS general substrate transporter 18 433 IPR036259 -
Stsc90697g00004 461 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 450 IPR044772 GO:0015112
Stsc90697g00004 461 Gene3D MFS general substrate transporter like domains 32 233 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90697g00004 Stsc-Chr90697 32211 42467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90697g00004 1 446 Inorganic Solute Cotransporters AT5G14570 62.661 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90697g00004 K02575 - qsa:O6P43_008930 670.618