LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc90696g00013	ATGCTGAAGGATGGTGTAGGAACACTGGGCGAGCTCTCATTTACAGATAATTCCAGCTGGATAAGAAGCAGGAAGTTCAGGCTGGGGCTGAAAGTTGCCTCAGGTTGCTGCGAGAGGATGCGCATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAACTATACAAGAAACACTACCCTCCCGCCTTGACTGATGAGGTATGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCTGGAATATATAGTGTTGAAGACTTCCTAAGACTTGTGGTCAGGGACCCTCAGAGATTACGGAATATTCTTGGGAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAACATGCAAAGACTTGTGTTCTCAGTGGAAATCTTTATGTATACTATCCTGACGATGCAAGAAACGTGGGTGTTGTTTTCAATAACATCTATGAGCTAAGTGGCTTAATTGCCAATGACCAATATTATCCAGCTGATTCTCTTTCAGAGAGCCAAAAGGTTTATGTTGACACATTGGTGAAGAGGGCATACGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGATAAATTACAATAATAAGACTTTGGACACCTCTCATCCTCAGGCTCAAATGAGCTCTCATGAATATTCAAACTCCTTCCAACAGATTTCAGTCCCAAGTTTGCCAGTTCCAGTAAACACTGGGCAGCCTTCAGTGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGTTCAGCTACCAGATTTGCAATGCATACCCAAAATGTTAATTCTTGTATTCAATTTGATAATAATGCATGCGCGCTACAAAACCAGTTAAATGCTTCGCACCAAGATCAGCTTCATAGAGATGACAGTATGGTAACACATGGTCTTTTACAATCAGCCACTCATGGCTTTCAGGCTGCAAGCACTTCAAATCCTAGTAATAGAGGAATCGAGGAATTGTTGCCAGAGGAAGAGATTCGTATTAGAAGTCATGAGATGCTGGAAAATGAAGACATGCAGCATCTGCTCCGTATCTTTAATATGGGTGGCCAAAATCATGGTTCCCTTATTAATGCTCATGAAGATGGGTTTCCATATTCATCTGCATACATGGCTGCAAACCCAATGAGCTACAATTGTGATGACGAGCGAGGCTGTTCTTCTGGCAAAGCTGTTGTCGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTAGGAAGAAGGCCGCTGAGAGACGGGCACAGCTTGTTGAGTTGGATGACCCATAG	1320	0.4288	MLKDGVGTLGELSFTDNSSWIRSRKFRLGLKVASGCCERMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGIYSVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGNLYVYYPDDARNVGVVFNNIYELSGLIANDQYYPADSLSESQKVYVDTLVKRAYDNWMHVIEYDGKSLINYNNKTLDTSHPQAQMSSHEYSNSFQQISVPSLPVPVNTGQPSVDSGVTVGGYHDGSATRFAMHTQNVNSCIQFDNNACALQNQLNASHQDQLHRDDSMVTHGLLQSATHGFQAASTSNPSNRGIEELLPEEEIRIRSHEMLENEDMQHLLRIFNMGGQNHGSLINAHEDGFPYSSAYMAANPMSYNCDDERGCSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDP	439

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc90696g00013	439	Pfam	Calmodulin binding protein-like N-terminal domain	2	55	IPR046831	-
	Stsc90696g00013	439	Pfam	Calmodulin binding protein C-terminal domain	139	200	IPR046829	-
	Stsc90696g00013	439	PANTHER	OS02G0177800 PROTEIN	2	353	IPR012416	GO:0005516
	Stsc90696g00013	439	Pfam	Calmodulin binding protein central domain	68	133	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc90696g00013	Stsc-Chr90696	71080	73269	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc90696g00013	2	434	Calmodulin-binding Proteins	AT5G57580	56.156	1.31e-168	486

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc90696g00013	-		-	gmx:100812605	711.835