Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90696g00003 ATGGGTAACGAAGAAGACTTCGCCGGAGAACCGAACCACTTTAAGAAGGAGGAACCCGCCGGAACTTCCAACCTCCTCCGGCGAGCTGCGGAGCTCATTGCCACCGTGCTCTCTCTCTCCCTCTCGATCAGGGCCTTCGCTACCAAATGGCAACTCATCCGGACCAAGCTCGAGGAGCTCCGCTCCGGCCTCATCGCCGCCGACAACTGCGACTCCGGCGAGAATCCCTATCTCACGGGAATCCTCCCATCGGTGATTTCGACAGCCGGTGAGTGCCGCGACTTGGCGCGCCGTTGCTCCGACCTCTCCTACAGCGGGAAGCTCCTTATGCAGAGCGATTTGGACATGGCGATCGCAAAGCTCGACGGCCACGTCAGCACCCTCTCTGAGATTTACAAAAGGGGAATCTTGGCGAATGGGTCTGCGCTTGTCGTTTCAAAACCGAGTATTGGCGCTTCAAGAGAAGACATAAGGTTCTATGTGAGGGACCTGTTAACGAGGATGAAGATTGGGGATTTGGGTATGAAGAAACTGGCTCTCAGGAACCTGTACGAGGTTGTCGTCGAGGATGAGAGGTACGTTAAGGCCGTTGTGGACGTTGGTGACGTGATTCACGTGCTGGTTGGGTTTCTTAGTTCAACTGAATTGGAAATCCAAGAGGAGAGTGCCAGGGTTGTTTCTGTGATTGCAGGTTTTGGTTGCTACAAGGGCAATTTGGTCAATTCCGGGGTGGTTGCGTCGTTGGTTAGGGTGCTGGATTGTGGGAGCGAAGAAGGTAAAGTTGCTGCAGCGAGGTGTTTGGTGAAGCTCACTGAGAATTCTGATAACGCTTGGTGTGTTTCTGCACATGGTGGTGTCACTGCATTGCTTAGAATTTGTGATGGTGATGATGGTGGTTGTAAGGGAGATTTGGTTGGTCCTGCGTGCGGTGTGTTAAGGAATCTTGTTAGTGTTGAAGAGATTAAGAGGTTTATGATCGAGGAAGGTGCGGTTTCTACGTTTCTAAGGCTTGTGAGGTCCAGGGATGAAGCTATTCAGGTTAATTCAATAGGCTTCATTCAGAACATTGCTTCTGGTGATGAATTGGTTAAGCAGATGGTCATTAGAGAAGGTGGAATCCGTGCCTTGTTGCGTGTTCTTGATCCTAAGTGGTCCTGCTCTTACAAAACAAGAGAGATTTCAATGAGGGCTATTGAGAATTTGTTTTTCTCTCCGCTTAGTTCTGTCACTGCTTTGATTAGTTACGGTTTTGTGGATAATCTGCTGTATTATGTTCGAAATGGCGAGGTTTCTATTCAAGAATTGGCTCTGAAAGTGGCGTTTCGATTGTCTGGGACGTCCGAGGAGGCCAAGAAATCAATGGGGGATGCAGGGTTCATGGCTGAGCTTGTCAAATTCCTGAATGCAAAATCGTTCGAGGTTCGCGAAATGGCAGCTGAGACACTGTCTGGGTTGGTTATGGTGCCTAAGAACAGAAAGAGGTTTGTGCAGGATGAGCATAACATTGCACTTATCCTTCAATTGCTTGACCCTGAAGAGGGGAATTCAGCACAGCTTCATGTTGAGATTTGTAACAAGATGTAG 1584 0.4931 MGNEEDFAGEPNHFKKEEPAGTSNLLRRAAELIATVLSLSLSIRAFATKWQLIRTKLEELRSGLIAADNCDSGENPYLTGILPSVISTAGECRDLARRCSDLSYSGKLLMQSDLDMAIAKLDGHVSTLSEIYKRGILANGSALVVSKPSIGASREDIRFYVRDLLTRMKIGDLGMKKLALRNLYEVVVEDERYVKAVVDVGDVIHVLVGFLSSTELEIQEESARVVSVIAGFGCYKGNLVNSGVVASLVRVLDCGSEEGKVAAARCLVKLTENSDNAWCVSAHGGVTALLRICDGDDGGCKGDLVGPACGVLRNLVSVEEIKRFMIEEGAVSTFLRLVRSRDEAIQVNSIGFIQNIASGDELVKQMVIREGGIRALLRVLDPKWSCSYKTREISMRAIENLFFSPLSSVTALISYGFVDNLLYYVRNGEVSIQELALKVAFRLSGTSEEAKKSMGDAGFMAELVKFLNAKSFEVREMAAETLSGLVMVPKNRKRFVQDEHNIALILQLLDPEEGNSAQLHVEICNKM 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90696g00003 527 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 372 IPR000225 GO:0005515
Stsc90696g00003 527 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90696g00003 527 SMART arm_5 318 358 IPR000225 GO:0005515
Stsc90696g00003 527 SMART arm_5 360 403 IPR000225 GO:0005515
Stsc90696g00003 527 SMART arm_5 232 272 IPR000225 GO:0005515
Stsc90696g00003 527 SMART arm_5 447 487 IPR000225 GO:0005515
Stsc90696g00003 527 SMART arm_5 273 317 IPR000225 GO:0005515
Stsc90696g00003 527 SMART arm_5 190 231 IPR000225 GO:0005515
Stsc90696g00003 527 Gene3D - 159 527 IPR011989 -
Stsc90696g00003 527 Pfam Armadillo/beta-catenin-like repeat 320 358 IPR000225 GO:0005515
Stsc90696g00003 527 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 516 - -
Stsc90696g00003 527 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 330 IPR000225 GO:0005515
Stsc90696g00003 527 SUPERFAMILY ARM repeat 162 515 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90696g00003 Stsc-Chr90696 11103 13213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90696g00003 172 377 U-box Gene Family AT2G23140 24.272 1.37e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90696g00003 - - psat:127100726 736.487