Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90696g00001 ATGTCCAAGGCAGAGAAGAAAGAGAGAGCAGAGCTCACAATAAGAGAGATGGGTTTGCAAGATGCTATCAACACCAGAATTGGAGGTTGGGGTTGCAAAGGGATCAGTGGTGGTCAGAAGAGGCGTGTCAGCATCTGCATTGAGATCCTAACAAACCCAACACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCCTATTATGTCATGAAAAGAATTAAGTCCCAGCTGGATCATAATGATGGCATTCAAAGGACTGTTATAGCCTCAATTCATCAGCCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTCTGTTTGCTATCTGCTGGCACAACAGTTTACTTTGGACCTGCTTCTTCTGCAATTCAGTTCTTCGCTTCAAATGGTTTTCCTTGTCCTGCTCTTCAAAATCCATCTGATCACTTATTGAAAACCATAAACAAGGACTTTGATGATCAGGAAATTGAGGTGGATTTAACAGCTGCAACTTCTGGAGGAGCATCACCCGCAGAAGAAGCAATTAGAATCCTTGTGAAGTCATACAAATCCTCAGAAATGAACCAACAAGTTCAAAAAGAAGTAGCTGCACTCTCTAAAAAGGGAACAAGTTCAGTAGAGAAAAAGAGAATGCATGCTAGCTTTCTTAGTCAGTGTGTTGTTCTTACCAAAAGATCATTCGTGAACATGTCTCGTGATTTAGGGTATTACTGGTTACGCCTTGCCATATATACTCTCTTGGCTATAAGTTTAGCCACAGTCTTCTATCATCTAGGAACAAGTTATGCTTCAATTAAGGATAGAGGTTCACTTCTTGCATTTATATCTACGTTCATAACTTTCATGAGCATTGGCGGGTTCCCTTCTTTTGTGGAAGACATGAAGGTATTTGAAAGAGAAAGGCTAAATGGGCATTATGGTGTGACAGCATTTGTGATGGGAAACACCTTATCAGCAACCCCATTTGTGTTGCTACTTTCATTCATTCCAGGAGCTATAACATATTTCCTCCCTGCTCTTCGGAGTGGATACGATCACTTCCTTTACTTCATCTGTGTTCTGTTTTCATGCCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCAAGCTTGGTCCCAAACTACCTAATGGGAATCATAACCGGTGCTGGAATTCAAGGGATATTTATCTTAGTTGCTGGCTTCTTCAAATTGCCAAGCAACATTCCTAAGCCATTTTGGAAATACCCTTTGCACTACGTAGCATTCCACACTTATGCATTCCAAGGGCTGTTCAAGAACGAGTATGAAGGCTTGAAATTTGACGGAGGGTTAACACGCAAGAAATACATAACAGGGGACGAGATTCTGAGAGACACGTGGCAAACGGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCATGCTAGGGATGATTCTTATTTATCGCGTCTTGTTCTTGGTTATCATAAAGACTACAGAGAAGGTGAAGCCTGTTATTGTTGGATTTTTCAACTTCTTTGCTCCCAAACAAACAGTTCATGTTGTGGAAAATCCTAATGCTACTCTTTTGCATGTGGAGCTTGCATGA 1584 0.4116 MSKAEKKERAELTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTNPTLLFLDEPTSGLDSAASYYVMKRIKSQLDHNDGIQRTVIASIHQPSAEVFQFFDNLCLLSAGTTVYFGPASSAIQFFASNGFPCPALQNPSDHLLKTINKDFDDQEIEVDLTAATSGGASPAEEAIRILVKSYKSSEMNQQVQKEVAALSKKGTSSVEKKRMHASFLSQCVVLTKRSFVNMSRDLGYYWLRLAIYTLLAISLATVFYHLGTSYASIKDRGSLLAFISTFITFMSIGGFPSFVEDMKVFERERLNGHYGVTAFVMGNTLSATPFVLLLSFIPGAITYFLPALRSGYDHFLYFICVLFSCLMLVESLMMIVASLVPNYLMGIITGAGIQGIFILVAGFFKLPSNIPKPFWKYPLHYVAFHTYAFQGLFKNEYEGLKFDGGLTRKKYITGDEILRDTWQTDMSYSKWVDLAIMLGMILIYRVLFLVIIKTTEKVKPVIVGFFNFFAPKQTVHVVENPNATLLHVELA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90696g00001 527 Pfam ABC-2 type transporter 96 152 IPR043926 GO:0140359
Stsc90696g00001 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 139 IPR027417 -
Stsc90696g00001 527 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 500 - -
Stsc90696g00001 527 Pfam ABC transporter 5 63 IPR003439 GO:0005524
Stsc90696g00001 527 Pfam ABC-2 type transporter 222 433 IPR013525 GO:0016020|GO:0140359
Stsc90696g00001 527 Gene3D - 1 168 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90696g00001 Stsc-Chr90696 5907 7853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90696g00001 19 121 Calmodulin-binding Proteins AT2G36910 33.010 3.01e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90696g00001 K05681 - gmx:100813462 767.303