Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90695g00012 | ATGGAATACAAACTGAATTCTTCAACAATTCCAGTCCTTGTTCCCGCAAAGATCTCAAATTCTCCACCTCCTTCTTCTTCATCTCCAAACTCACACTCTCAATCTCAGTCTCCAACTTCCTCTGCTGCCCCATCGCCTCCTCCTCTTCCTCCGCCTCCTGTGGTGGTCAGCCCTTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTCCCTCCAACTGATCCACTCAAGTTCACCATTGCACATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTTCCAGAAAGCCAAAGGGCAGATGCAGTGAGCAGCATGGTGTATGAAGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTTAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTGGTTAACATGCACTGCCAACAAGCCAATTTGGTTGCACTCATTTGCATGGAAATGAGTAGTAGTAATACTCAATTGTCATCTTCTCAGGAACACCAACAACAACAACACCACATGATGATGATTCAGCCTCAGATTAATAATAATAATAATAATCATGTTGATATGACTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTCTATGGACATGA | 696 | 0.4511 | MEYKLNSSTIPVLVPAKISNSPPPSSSSPNSHSQSQSPTSSAAPSPPPLPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQANLVALICMEMSSSNTQLSSSQEHQQQQHHMMMIQPQINNNNNNHVDMTCFIDDNNLASAWEPLWT | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90695g00012 | 231 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 57 | 202 | - | - | |
Stsc90695g00012 | 231 | MobiDBLite | consensus disorder prediction | 14 | 49 | - | - | |
Stsc90695g00012 | 231 | Coils | Coil | 137 | 164 | - | - | |
Stsc90695g00012 | 231 | MobiDBLite | consensus disorder prediction | 14 | 40 | - | - | |
Stsc90695g00012 | 231 | ProSiteProfiles | LOB domain profile. | 57 | 158 | IPR004883 | - | |
Stsc90695g00012 | 231 | Pfam | Lateral organ boundaries (LOB) domain | 58 | 155 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90695g00012 | Stsc-Chr90695 | 70480 | 72663 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90695g00012 | 54 | 231 | AS2 family | AT1G07900 | 63.536 | 1.08e-74 | 223 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc90695g00012 | LOB | 3e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90695g00012 | - | - | qsa:O6P43_005075 | 263.848 |