Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90695g00012 ATGGAATACAAACTGAATTCTTCAACAATTCCAGTCCTTGTTCCCGCAAAGATCTCAAATTCTCCACCTCCTTCTTCTTCATCTCCAAACTCACACTCTCAATCTCAGTCTCCAACTTCCTCTGCTGCCCCATCGCCTCCTCCTCTTCCTCCGCCTCCTGTGGTGGTCAGCCCTTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTCCCTCCAACTGATCCACTCAAGTTCACCATTGCACATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTTCCAGAAAGCCAAAGGGCAGATGCAGTGAGCAGCATGGTGTATGAAGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTTAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTGGTTAACATGCACTGCCAACAAGCCAATTTGGTTGCACTCATTTGCATGGAAATGAGTAGTAGTAATACTCAATTGTCATCTTCTCAGGAACACCAACAACAACAACACCACATGATGATGATTCAGCCTCAGATTAATAATAATAATAATAATCATGTTGATATGACTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTCTATGGACATGA 696 0.4511 MEYKLNSSTIPVLVPAKISNSPPPSSSSPNSHSQSQSPTSSAAPSPPPLPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQANLVALICMEMSSSNTQLSSSQEHQQQQHHMMMIQPQINNNNNNHVDMTCFIDDNNLASAWEPLWT 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90695g00012 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 57 202 - -
Stsc90695g00012 231 MobiDBLite consensus disorder prediction 14 49 - -
Stsc90695g00012 231 Coils Coil 137 164 - -
Stsc90695g00012 231 MobiDBLite consensus disorder prediction 14 40 - -
Stsc90695g00012 231 ProSiteProfiles LOB domain profile. 57 158 IPR004883 -
Stsc90695g00012 231 Pfam Lateral organ boundaries (LOB) domain 58 155 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90695g00012 Stsc-Chr90695 70480 72663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90695g00012 54 231 AS2 family AT1G07900 63.536 1.08e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90695g00012 LOB 3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90695g00012 - - qsa:O6P43_005075 263.848