Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90693g00015 ATGGGGAAGGGAAGAAGTCCTGGTAAATGGTTCAAGAATTTTATCTTGGGAAGGAAATCATCATCAAAGTCTAATTCCTCAAAGAAAAAGGATATTTTTAAACTAAATAACAATGAAGTGCTGGGCTCTTCTGAGATATCGGTGTCTGATCCAACTGTGGATTCTTTGGTGATATCGGCGCCAATTTCTGGAGCTAATTCTATTAATGGAGTACTTTCCGAAAAGAACAAGTCATCCAATGAAAGGGATATCCTTTCAACCGGAGGTGGAGAGTCACGTGTACAAGCTGATGGTGCTTTTAGATCTCAAGAGGATCATGAGAATCTCAAGCTTACAGAAGCTGCTATAAAAGTACAGGCTGCTTGCAGAGGCTATCAGGCTCGTCGGACATTTCAAATGCTCAAAGGTATCATACAACTGCAAGCTCTTATCCGTGGCCGATTGGTTAGAAAACAAGCTGTTGCTGCTTTATACTGTGTGAAGGGAATAGTTAAGTTTCAAGCGTTGGCTCGGGGATACATTGTTAGACGCTCTGATATTGGCCTTGAAGTCCTTAAAATTCGTAAGGATACCCAACATTCAAATTCTATTCAAGTGGCTACATCTACCCAGGCTAAGAAGCTGCCAGAAAGTGTCTTTGTTTGCAAGCTTCTGGCTTCATCGGGCTCTGTGGTTCCATCATCTCTCAATTGTGATCCTAACGAACCTAACTTAGGTTGGAAATGGCTTGACAGTTGGACAAGGCTCTTTTGGGCACCTCCTCAGGTTGTGAAGAAGAAATTTGACCCTGTCTCTGGTGAGAAAGGCAGCAGTAATCAAGCAGTTAAAAGGAAGCAAGTCAAAAGAACTACACAGAAATCCCCTACGCTGAAAGCTGATGATGTGACAACTTCAGGTGCTAACAAATATAAACAGCGTCCGAAAAAGGATTTGAACAGCCCATCAGTTTCAGCTCAGGAACATGCGCAAAAGGAAGTAGAGAAAAATAGTTCGAAAAAAACTCGTCTGCCGAATGTTTCTGATAGATCTGAGGCGGTTACTGAAAAAAGAAAACAAAGTACTAAAAGGAGTTCAGAGCATACTGTCGCTGATGTTTCAGAGCAGGGGTTAAGTGCCTCATTGGAGAAAAGGAAAGATTTGGCACTGTCAAAGTGTAAAGAGTCTGATGCAAAGAAAAATCTTGGTCAGCCAGAAAAAGATAATCATGATACTGAGCCGAATAGTCTCAAGAAATCTTGTGTGGAGAATGTTGTAGATAGATCTGAGAGTGTTATTGAGGAACAAAAGCACTGCAGTATAAAAGTTTCAGATGAAACTGTCACTGATGTTTCAGATCCGGGCACTAGTGCCTCTCCCGAGAACAAGAAAGATTTGACAGTGTTAGAGTCTAAAGGATCTGATTCTGAGAAATGTCTTGGGCAAAAAGAAGACAATGAGCCTCATAGTCCTGAAAAAATTGTCAGCCAGAGTGCTGAAGATAGATCTGAAAGTGTCAATCATAAAAGAAAGAACAGCACTATAGAAGATTCAGATCATACTGTTAGTGATGTTTTGGAGCAGGGCACAAGTGCGACCCCAGAGAAAAAGAAAGATTTGGCAGTGTCAAAGGAATCTGATCCTGAAAAAATTATTGGACAACAAGAAGATAAACATGTTAAGGGGAATAGTAACCCTAAAAAAGGTCATGTTCAGACTGTTGCAGATAGTTCTGAGATTGTCCATGAGAAAAGAAAAAACAGCACTAAGAAAATTTCAGACCATACTGTTGCTGATGTATCAGAGCAGGGCACAAGTGCCTCTTCAGAGAAAAAGAAAGCATTAAAAGTGTCCAAGTCCAAAGAGTCCGATCCCGCAAAAAGTACTGGACAGACAGCAGGAAGCAAGCATGATATTGAGCCACATAACGATCTTATTGCTGTCTCGCAGACTACTTTGACAAATGGTATAAATGCAGAAACTCAAGGAACCAGTGAGGACTTGAATGGCGGTGATGGTTATATCGGTAACAATTGCCAGAGAAGAGCTTCACTTCCCGCTAATTTCAGTGATCAGGATAGTGAGTTGCACAGCACTCCACGATTGCCCAGTTATATGGCTCCGACTGAATCGGCGAAGGCTAAGCTACGACCACAAGGCTCCCCTAGGTTTGCCGCTGATTTGTTAGACAAAAATGCTATGACCAGGAGGCATTCGCTTTCATCTTCGTTTAATAGCAAGTCAGGTTCGTTTTCCCCCAGAGCAGAAAGATTGGTAGCCTTGAGCAGCAAAGGAGCAATAAGGAGTGATCGATCTCTGTCGTCTTCAAGGGATGTGACTGATAAGGTGATCCAACCTCAATGGAGAAGGTGA 2349 0.4206 MGKGRSPGKWFKNFILGRKSSSKSNSSKKKDIFKLNNNEVLGSSEISVSDPTVDSLVISAPISGANSINGVLSEKNKSSNERDILSTGGGESRVQADGAFRSQEDHENLKLTEAAIKVQAACRGYQARRTFQMLKGIIQLQALIRGRLVRKQAVAALYCVKGIVKFQALARGYIVRRSDIGLEVLKIRKDTQHSNSIQVATSTQAKKLPESVFVCKLLASSGSVVPSSLNCDPNEPNLGWKWLDSWTRLFWAPPQVVKKKFDPVSGEKGSSNQAVKRKQVKRTTQKSPTLKADDVTTSGANKYKQRPKKDLNSPSVSAQEHAQKEVEKNSSKKTRLPNVSDRSEAVTEKRKQSTKRSSEHTVADVSEQGLSASLEKRKDLALSKCKESDAKKNLGQPEKDNHDTEPNSLKKSCVENVVDRSESVIEEQKHCSIKVSDETVTDVSDPGTSASPENKKDLTVLESKGSDSEKCLGQKEDNEPHSPEKIVSQSAEDRSESVNHKRKNSTIEDSDHTVSDVLEQGTSATPEKKKDLAVSKESDPEKIIGQQEDKHVKGNSNPKKGHVQTVADSSEIVHEKRKNSTKKISDHTVADVSEQGTSASSEKKKALKVSKSKESDPAKSTGQTAGSKHDIEPHNDLIAVSQTTLTNGINAETQGTSEDLNGGDGYIGNNCQRRASLPANFSDQDSELHSTPRLPSYMAPTESAKAKLRPQGSPRFAADLLDKNAMTRRHSLSSSFNSKSGSFSPRAERLVALSSKGAIRSDRSLSSSRDVTDKVIQPQWRR 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 759 774 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 523 556 - -
Stsc90693g00015 782 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Stsc90693g00015 782 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Stsc90693g00015 782 Pfam IQ calmodulin-binding motif 161 177 IPR000048 GO:0005515
Stsc90693g00015 782 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Stsc90693g00015 782 ProSiteProfiles IQ motif profile. 133 162 IPR000048 GO:0005515
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 569 589 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 371 436 - -
Stsc90693g00015 782 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Stsc90693g00015 782 SMART iq_5 133 154 IPR000048 GO:0005515
Stsc90693g00015 782 SMART iq_5 158 180 IPR000048 GO:0005515
Stsc90693g00015 782 SMART iq_5 110 132 IPR000048 GO:0005515
Stsc90693g00015 782 Gene3D - 108 159 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 754 782 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 457 515 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 321 362 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 285 302 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 261 640 - -
Stsc90693g00015 782 MobiDBLite consensus disorder prediction 437 456 - -
Stsc90693g00015 782 Pfam Protein of unknown function (DUF4005) 684 761 IPR025064 -
Stsc90693g00015 782 ProSiteProfiles IQ motif profile. 161 186 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90693g00015 Stsc-Chr90693 92654 98094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90693g00015 651 782 IQD Protein Family AT1G14380 41.096 3.89e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90693g00015 - - aip:107643525 1233.01