Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90693g00013 ATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTAGATTCTTGGGATGTGTGTAAATCAAAGGGGAAGAAGAAGAACAGTAAGAACTTGAAGCAGAAGGAAGGTGAGGTAGTGGTGGTGGAGGAAGATGAAGAGTTTGAGAGAGAAACTGGATGTTGGGTTAGGCTAAGGTTCATGGGTAGCTGCATTTCTTCAAGACCCAAAGTTGACAACTCAGTCAGTGGCACCACCACTCATGATGCTGAAAGTAAGTCAACTAGTGATACAAGTAGAGACCAACCAAGTGAACCAACAGCGCCAGTAGTCTCATCGACAACTACAACTACTAGCAATGCAAGCAGTTCATCAACTTCTAAACTCGAAGAGGAGCTTAAAGTTGCCTCCAGGCTAAGAAAGTTCTCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTCCGGCCTGAGAGTCTTCTTGGCGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGGTTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTCGCTGTGAAAACCCTCAACCATGATGGGCTCCAAGGCCATAAAGAATGGCTGGCTGAAGTGAACTTTCTTGGTGATCTAGTCCATCCACACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTTGAAAATCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCGTTAGGTTGAAAATTGCACTAGGAGCAGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGAGATTTTAAAACTTCAAATATATTATTAGATGCAGAATACAATGCCAAGCTCTCAGACTTTGGACTCGCTAAAGATGGTCCAGAAGGAGATAAAACCCATGTGTCTACCCGAGTGATGGGAACCTATGGTTATGCCGCACCGGAATATGTCATGACAGGTCATCTTACATCAAGAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGACAAACACCGTCCCAATGGTGAACATAATCTTGTGGAATGGGCTCGGCCTCATCTGGGAGAGAAGAGAAGGTTCTATAGGCTGTTGGACCCTCGCCTTGAAGGCCATTTCTCGATAAAAGGAGCTCAGAAAGCCGCCCAAATTGCTGCTCGCTGCCTTAGTAGAGATCCAAAAGCAAGACCCCTAATGAGTGAAGTTGTAGAAGATCTAAAGCCTCTGCTAAGTCTTAGGGACATGGCAAGCTCTTCGTATTACTTCCAGACGATGCAAGCTGACCGCTTTAGCCCTAGCCCAAATACCCGAAATGGTCGGACACAAGGAGTGCTCCTTGGCCGGAATGGGCAGAGGAGTCTTTCAATACCCAATGGTACTCATGCCTCTCCATATCACCATCAGTTTCCCCAACAATCACCAAAACCTAATGGCAAAGCATAG 1497 0.4562 MGLGAENGKVVDSWDVCKSKGKKKNSKNLKQKEGEVVVVEEDEEFERETGCWVRLRFMGSCISSRPKVDNSVSGTTTHDAESKSTSDTSRDQPSEPTAPVVSSTTTTTSNASSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSVRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGEKRRFYRLLDPRLEGHFSIKGAQKAAQIAARCLSRDPKARPLMSEVVEDLKPLLSLRDMASSSYYFQTMQADRFSPSPNTRNGRTQGVLLGRNGQRSLSIPNGTHASPYHHQFPQQSPKPNGKA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90693g00013 498 Gene3D Phosphorylase Kinase; domain 1 103 229 - -
Stsc90693g00013 498 Gene3D Transferase(Phosphotransferase) domain 1 230 444 - -
Stsc90693g00013 498 MobiDBLite consensus disorder prediction 66 82 - -
Stsc90693g00013 498 MobiDBLite consensus disorder prediction 89 120 - -
Stsc90693g00013 498 MobiDBLite consensus disorder prediction 66 120 - -
Stsc90693g00013 498 FunFam Probable serine/threonine-protein kinase PBL8 230 445 - -
Stsc90693g00013 498 MobiDBLite consensus disorder prediction 468 498 - -
Stsc90693g00013 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Stsc90693g00013 498 FunFam Serine/threonine-protein kinase BIK1 111 229 - -
Stsc90693g00013 498 ProSiteProfiles Protein kinase domain profile. 144 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90693g00013 498 CDD STKc_IRAK 150 427 - -
Stsc90693g00013 498 Pfam Protein tyrosine and serine/threonine kinase 148 424 IPR001245 GO:0004672|GO:0006468
Stsc90693g00013 498 PANTHER OS01G0588500 PROTEIN-RELATED 105 426 - -
Stsc90693g00013 498 ProSitePatterns Protein kinases ATP-binding region signature. 150 182 IPR017441 GO:0005524
Stsc90693g00013 498 SUPERFAMILY Protein kinase-like (PK-like) 130 449 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90693g00013 Stsc-Chr90693 81900 85619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90693g00013 130 424 Glycoside Hydrolase AT3G07070 59.060 4.43e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc90693g00013 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90693g00013 - - gmx:100787151 812.757