Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90692g00002 ATGGACATGAACTTTGTTGTTGTGTTAGCTTCATTTTTGGCCCTACTACTAAGTAGTAGTGCACAAACAAGCTCTGCTCAACTCTCTCGTGGCTTCTACAGCAGTACATGCCCCAATGTGGAACAGCTAGTTCGCGCCGCCGTCACGCAGAAGTTGCAGCAGACATTTGTGACGGCTCCTGCCACTCTCCGCCTCTTCTTTCATGATTGTTTTGTCAGGGGTTGTGATGCTTCAGTTCTGCTTGTGTCTCCGGCTAACCAGGCAGAGAGGAACCACCCGGACGACGTGTCGCTAGCCGGGGACGGTTTCGACACGGTGGTTAAGGCCAAGGCAGCCGTTGATAGTGATCCTCAGTGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTCTGGCTACTAGAGATGTAGTCAACTTGGTTGGGGGACCATTTTATGAAGTTGAATTGGGAAGGCGTGATGGAAGAATATCTACTATTGCAAGTGTTCAACACCGTCTTCCTGGCCCTGATTTCAATTTGGATCAGCTCAATTCTTTGTTTATCTCTAATGGCCTCTCTCAAACAGATATGATTGCATTATCAGGTGGACATACAATTGGATTCTCTCACTGCAACAAATTCTCAAAAAGAATTGGAAACAGAATTGATCCCACAATGAATCTGCAATATGCCTTGAAACTCAAACAAACATGCCCTGTGAATGTTGATCCAAGAGTAGCCCTAGCTTTGGACCCTTTCACACCTCAAACATTTGATAACCAATACTTCAAGAACTTGCAACAAGGAATGGGACTCTTGTCTTCTGATCAAGTGCTTTTCACTGATCCAAGGTCAAGGGACACTGTCAACTTGTTTGCATCAAATGAACAAGCATTTCATGATGCTTTTGTCACTGCTATTACCAAATTGGGCAGGGTAGGTGTTAAGACTGGAAATCAGGGTGAAATTAGGGTTGACTGCTCCAAGCTCAATTAG 975 0.4492 MDMNFVVVLASFLALLLSSSAQTSSAQLSRGFYSSTCPNVEQLVRAAVTQKLQQTFVTAPATLRLFFHDCFVRGCDASVLLVSPANQAERNHPDDVSLAGDGFDTVVKAKAAVDSDPQCRNKVSCADILALATRDVVNLVGGPFYEVELGRRDGRISTIASVQHRLPGPDFNLDQLNSLFISNGLSQTDMIALSGGHTIGFSHCNKFSKRIGNRIDPTMNLQYALKLKQTCPVNVDPRVALALDPFTPQTFDNQYFKNLQQGMGLLSSDQVLFTDPRSRDTVNLFASNEQAFHDAFVTAITKLGRVGVKTGNQGEIRVDCSKLN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90692g00002 324 FunFam Peroxidase 167 303 - -
Stsc90692g00002 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Stsc90692g00002 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 Gene3D Peroxidase, domain 2 167 303 - -
Stsc90692g00002 324 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc90692g00002 324 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PANTHER - 8 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Stsc90692g00002 324 Gene3D - 31 324 - -
Stsc90692g00002 324 FunFam Peroxidase 31 175 - -
Stsc90692g00002 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90692g00002 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90692g00002 Stsc-Chr90692 9141 10850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90692g00002 11 324 Peroxidase AT2G18980 70.219 4.92e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90692g00002 K00430 - gmx:100808542 499.59