Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90690g00002 ATGTCTGCTTGGATTCTTGCACTTGCTACTATTCTAGTAGCAATCTTAATTTACCAAACAATAAAGTTCATAACTCATCGCTTTTCATCATCAATCCCACTACCACCGGGTCCAAGGCCATGGCCTATCATAGGAAACCTTCCACACATGGGCCCTGTCCCACACCATGCCCTCGCGGCCTTGGCTCGCACCCACGGCCCACTCATGCACCTCCGGCTAGGTTTTGTGGACACCATGGTGGCATCATCGGCCGCGGTGGCTCAACAATTCTTAAAGGTTCACGATGTCAATTTCTCTAATCGGCCGCCCAACGCCGGGGCCAAATACATGGCTTACAACTATAATGACCTTGTTTTTGCACCCTATGGCCCACGGTGGCGGTTGCTCCGGAAAATCACCTCCACTCACATGTTCTCCGGGAAGGCCATGAATGATTTTAGACACATCCGGCAGGAAGAGGTAGCAAGATTAACGCACAATCTAGCAAGTTCATCCCCAAAAGCAGTGAACCTTGGACAGCTTCTTAACGTGTGCACCACCAACGGAATAGCAAGGGTACTACTCGGGCGGCGAGTCTTCGATGACGGCAACGGCGGCTGCGACCCGAGGGCCGAAGAGTTCAAGTCCATGGTGGTGGAGCTCATGGTTCTTGCCGGAGTTTTCAACATCGGAGACTTCATTCCTGCGTTGGAGTGGCTTGATCTTCAGGGCGTGCAAGCTAAGATGAAGAAACTACACAAGAGGTTTGACGCATTCCTAGGAAGCATTGTTGAGGAACACAAGCAAGGTTGTTCCGATAAGAGTGAGAGCCACCAAGATTTGTTGACTACGTTGTTGTCCCTCGAAGACGACGATGGAACCAAACTCACTCACACTGAGATCAAGGCCCTACTTTTGAATATGTTTGCAGCAGGAACAGACACAACATCGAGCACAATAGAATGGGCAATTTCGGAAATAATTAAAAACCCAAGAATACAAGCCCAAGTCCAAGAAGAGCTGGACTCAGTAGTGGGCCGAGACACGCTCGTAACGGAATTGGACTTAGCCCACCTACCTTACTTAGAGGCAGTGGTAAAGGAAACTTTTCGTCTCCACCCATCAACCCCTCTTTCCCTGCCACGTGTTGCATCAGAGAGCTGTGAGATCTTCAACTACCACATCCCAAAAGGTGCAACCTTGCTTGTGAACATATGGGCCATATCACGTGACCCAAAAGAGTGGGCTGACCCATTAGAGTTCAGGCCCGAGAGGTTCCTCCCTGGTGGTGAGAAAGCCCATGTTGATGTTAAAGGGAATGACTTTGAGGTTATACCGTTTGGTTCAGGGCGTAGGATTTGTGCTGGAATGAGCCTTGGTGTGAGGATGGTTCAGTTGGTAACTGCCACATTGGTCCATGCATTTGACTGGGAATTGGAAAATGGCTTGAACCCAGAAAAGCTGAACATGGATGAGGCCTATGGGCTTACTCTCCAAAGAGCAGCGCCACTTACGGTGCACCCTCGCGTTAGGCTCTCACCGCTCGTCTACTCGCCGTGA 1539 0.5023 MSAWILALATILVAILIYQTIKFITHRFSSSIPLPPGPRPWPIIGNLPHMGPVPHHALAALARTHGPLMHLRLGFVDTMVASSAAVAQQFLKVHDVNFSNRPPNAGAKYMAYNYNDLVFAPYGPRWRLLRKITSTHMFSGKAMNDFRHIRQEEVARLTHNLASSSPKAVNLGQLLNVCTTNGIARVLLGRRVFDDGNGGCDPRAEEFKSMVVELMVLAGVFNIGDFIPALEWLDLQGVQAKMKKLHKRFDAFLGSIVEEHKQGCSDKSESHQDLLTTLLSLEDDDGTKLTHTEIKALLLNMFAAGTDTTSSTIEWAISEIIKNPRIQAQVQEELDSVVGRDTLVTELDLAHLPYLEAVVKETFRLHPSTPLSLPRVASESCEIFNYHIPKGATLLVNIWAISRDPKEWADPLEFRPERFLPGGEKAHVDVKGNDFEVIPFGSGRRICAGMSLGVRMVQLVTATLVHAFDWELENGLNPEKLNMDEAYGLTLQRAAPLTVHPRVRLSPLVYSP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90690g00002 512 FunFam Red aleurone1 26 502 - -
Stsc90690g00002 512 Gene3D Cytochrome P450 19 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PANTHER CYTOCHROME P450 98A9 5 510 - -
Stsc90690g00002 512 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Stsc90690g00002 512 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90690g00002 512 Pfam Cytochrome P450 35 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90690g00002 Stsc-Chr90690 19336 22570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90690g00002 10 511 Cytochrome P450 AT5G07990 64.173 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90690g00002 K05280 - gmx:547475 811.601