Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90687g00005 ATGGCACTCATCATCGCCGGCCGTGGCCGCGGTCGCGGCTGGCCATGTACAATCATCCTGATGATCCACCTTGTAGTCACCATTTTCGGAGCCTCCGACACAGATCTACTCCTTAAGTTCAAGGAGTCCCTTCAATTTAACGGCGATCCGTTATCGTCTTGGAACGCAACCATGCCTCCGTGTAACGGAGGAAAGCCGAATTGGCCTCACATCTTTTGCTATAACGGAAACACGTGGGGGATCAAGCTTGAGAGGATGGGGATCAAGGGATCCATCGATGTGGACTCTTTGAAGGGTCTACCATATCTTCGAACAATAAGTTTGATGCACAATAATTTGCAAGGATCATGGCCTGAACTGAATAAGTTGCCGGGATTGAAGGCGGTTTATCTTTCCGATAACCAATTCTCCGGCGAGATTCCGGGGGATGCGTTTGCCGGTATGCAATGGTTGAAGAAGATTTATTTGTCAAATAACAAGTTTAGTGGTCCTTTGCCGAGTTCCCTAACGACCATGCCCAGGCTTAGGGAGCTAAGGTTGGAGGGAAACCAATTCAAGGGTACAATTCCAGAATTACCCCCAACTTTGAGATCACTTTGCGTTGCTAATAATGAATTAGAAGGGCAAATACCACGCAATTTAACCAAGTTTCCTCGTGCATCTTTTGCCCCCGGTAACAAAAAGCTATGTGGATTCCCATTAAAAAACAGATGTGCATCGAACAAGACATCATTAGCGAGCGTACTTGTGCTTGCCATACTTGCTTTGTTGGCATTACTTGTGATTGCATTCATCTTATTACTCTTCCTTCACAAAAAGAAGAAACAAAGAAAAGAAGAAAGAACACATCATCATCATCAACCACCAATAATAACAACACATCATCATCAACCTCCAATAACAACAACAACAGCATCAACAAGAGAACCTGCAGAAACTTCATTGCCATTGGAGACTCCTCCATCAATTCCCTCAACTCTCCACAAGAAAGTTGGAGATCTTTCTGATGATATTGATGGTGGCGGTAGCGTAAGGTCTTTGAAGTCATCAAATATTGGATCTTCACGTGGAAGCAAGAAATCAGAGAGCTTGAGGTTATCATTTGTGAAGTTGGAGGAAGGAAGTGAAGAGTTTGATATGCAAGATCTTTTGAAGGCCTCTGCTGAGATTCTAGGAAGTGGTCCTTACAGTTCTTCATATAAGGCTTCTTTGTTATCTGGAACTAAAATGGTTGTTGTCAAGAGATACAAGCAGATGAACAATTGCAATAAGGATGAATTTCAAGAACACATGAGAAGGATTGGGATGTTGAATCACCCTAATTTGCTTCCTTTGGTGGCTTACTACTTCAGAAAGGAAGAGAAGCTCTTGGTTACTGATTTTGTTGCTAATGGCAGCTTGTGTGTTCGCCTTCATGGACACCAAGCATTGGGTCTACCAAGCCTTAAATGGCCAACAAGATTAAAGATAGTGAAAGGAATATCAATTGGTCTTGAGTTTCTATACAAGGAAATGCCAAGCCTTATTGCACCACATGGCCATCTAAAATCATCAAATGTTCTTCTAAATGAGAGCTATGAACCAATCCTAGCAGACTATGCTTTAGTGCCATTGATAAACCAAGAGCTAGCTCCAGACATTATGGTAATTTACAAGTCACCAGAGTACTTGCAACAAGGCAGAGTCACAAAGAAATCTGATGTTTGGAGCCTTGGGATCTTGATCTTGGAGATCCTAACTGGGAAAATCCCATCAAATTTCTTGCAACAAGGGAAAGGGAGTGAGCTGAGCTTAGCAAATTGGGTTGATTCAATTGTTCCTGAACAGTGGAGTGGTGAGGTTTTTGATAAACAAATGGGTGCAAGCAAAGAAAATGAGGTTGAGATTTCAAAGCTTTTGAGGATTGCTTTGGCTTGTTGTGAAGCTGATGTGAATAAGAGATTGGACATCAAAGAAGCTGTGGAAAGAATCCAAGAGGTGAAGGAGAGTGGTGGAAACTGA 2001 0.4248 MALIIAGRGRGRGWPCTIILMIHLVVTIFGASDTDLLLKFKESLQFNGDPLSSWNATMPPCNGGKPNWPHIFCYNGNTWGIKLERMGIKGSIDVDSLKGLPYLRTISLMHNNLQGSWPELNKLPGLKAVYLSDNQFSGEIPGDAFAGMQWLKKIYLSNNKFSGPLPSSLTTMPRLRELRLEGNQFKGTIPELPPTLRSLCVANNELEGQIPRNLTKFPRASFAPGNKKLCGFPLKNRCASNKTSLASVLVLAILALLALLVIAFILLLFLHKKKKQRKEERTHHHHQPPIITTHHHQPPITTTTASTREPAETSLPLETPPSIPSTLHKKVGDLSDDIDGGGSVRSLKSSNIGSSRGSKKSESLRLSFVKLEEGSEEFDMQDLLKASAEILGSGPYSSSYKASLLSGTKMVVVKRYKQMNNCNKDEFQEHMRRIGMLNHPNLLPLVAYYFRKEEKLLVTDFVANGSLCVRLHGHQALGLPSLKWPTRLKIVKGISIGLEFLYKEMPSLIAPHGHLKSSNVLLNESYEPILADYALVPLINQELAPDIMVIYKSPEYLQQGRVTKKSDVWSLGILILEILTGKIPSNFLQQGKGSELSLANWVDSIVPEQWSGEVFDKQMGASKENEVEISKLLRIALACCEADVNKRLDIKEAVERIQEVKESGGN 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90687g00005 666 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Stsc90687g00005 666 Gene3D Phosphorylase Kinase; domain 1 348 461 - -
Stsc90687g00005 666 ProSiteProfiles Protein kinase domain profile. 385 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90687g00005 666 Gene3D Ribonuclease Inhibitor 32 144 IPR032675 -
Stsc90687g00005 666 MobiDBLite consensus disorder prediction 344 358 - -
Stsc90687g00005 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 662 IPR046959 -
Stsc90687g00005 666 Gene3D Transferase(Phosphotransferase) domain 1 462 664 - -
Stsc90687g00005 666 SUPERFAMILY L domain-like 32 217 - -
Stsc90687g00005 666 MobiDBLite consensus disorder prediction 278 358 - -
Stsc90687g00005 666 Pfam Leucine rich repeat 124 185 IPR001611 GO:0005515
Stsc90687g00005 666 MobiDBLite consensus disorder prediction 294 321 - -
Stsc90687g00005 666 Gene3D Ribonuclease Inhibitor 145 240 IPR032675 -
Stsc90687g00005 666 Pfam Protein tyrosine and serine/threonine kinase 389 656 IPR001245 GO:0004672|GO:0006468
Stsc90687g00005 666 SUPERFAMILY Protein kinase-like (PK-like) 389 658 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90687g00005 Stsc-Chr90687 18771 23852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90687g00005 18 666 Receptor kinase-like Gene Family AT5G35390 47.463 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc90687g00005 PK_Tyr_Ser-Thr 4.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90687g00005 - - gmx:100785189 663.685