Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90686g00016 ATGAGTGAAGAGATGATGAAAAGGTTTGAACTGCCACCAGGTTTCAGGTTTCATCCAACAGATGAAGAGCTCATAACTCACTACCTCACTCAGAAGGTTCTTAGTGATGATGATGATGATAACTGCTTCTATGATACAGCCATTATTGGAGAGGCTGATTTCAACAAGTGTGAGCCTTGGGATTTGCCTTACAAAAAATACCCAACAGGTTTAAGGACAAATAGAGCCACTGGTGCTGGGTATTGGAAGGCCACAGGGAAAGACAAAGAGATATACAATAATAATGCAAATAAAGCACTTATTATTGGGATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCTCCAAATGGTGAAAAGACAAATTGGGTCATGCATGAATATAGGTTGGAAGGTCATCATAAACATTCTATGTACAATCTACCCAAAACAACCCAGAAAGAGTGGGCTCTACGCAGAGTTGTACACAAAAGTGAAAAGAAAATCCATGTTCCACAATTCATGGATTCTTCACAAGTAACATTGTTTTCAGACCCAAATAATAATCAAAGTGATGATCCAAATCCAATGACACATGAAGAAGATAATGATGACATGATTGTTGATAGCTTTGAAACTCCTCCTTTCTTGGAACAACCTTATTCTTCATCATCATATGATTCTTCTAACTTAGACACCCTTAATCATGCCACATGGGATTTTACCAAAAATGCCCCTAATAGTAATGTGTCCAATCATTCCACACAAATTGGAAATTATTTTGTGGCACAAAATCAGAAATCTAAGGAGAGGGACTTTGATGGTGACATATTCTCTTCGATGTACAACAAAGAAATGTTAGAAATGTCATTTGGGAATCATCAAGAATATTGTGCATATGGTTCTTTAGGACATGTGGAAAATGGTTCCTTATGGAATTTTTAG 924 0.368 MSEEMMKRFELPPGFRFHPTDEELITHYLTQKVLSDDDDDNCFYDTAIIGEADFNKCEPWDLPYKKYPTGLRTNRATGAGYWKATGKDKEIYNNNANKALIIGMKKTLVFYKGRAPNGEKTNWVMHEYRLEGHHKHSMYNLPKTTQKEWALRRVVHKSEKKIHVPQFMDSSQVTLFSDPNNNQSDDPNPMTHEEDNDDMIVDSFETPPFLEQPYSSSSYDSSNLDTLNHATWDFTKNAPNSNVSNHSTQIGNYFVAQNQKSKERDFDGDIFSSMYNKEMLEMSFGNHQEYCAYGSLGHVENGSLWNF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90686g00016 307 MobiDBLite consensus disorder prediction 169 196 - -
Stsc90686g00016 307 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Stsc90686g00016 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 235 - -
Stsc90686g00016 307 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Stsc90686g00016 307 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Stsc90686g00016 307 MobiDBLite consensus disorder prediction 169 187 - -
Stsc90686g00016 307 Pfam No apical meristem (NAM) protein 12 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90686g00016 Stsc-Chr90686 84166 86611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90686g00016 10 235 NAC Transcription Factor Family AT5G18270 46.032 9.51e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc90686g00016 NAM 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90686g00016 - - ahf:112784292 375.555