Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90686g00007 ATGGCTGCTGTCTCAGTTTCAGACAGAGGCAACCATTCTTCTCCTTCTTATCTGATCCCCAGCTTCCTCTACTCCTCTTCATCTTCCTCTTCATTGTCTTCCTCTTTGGGAGGAGGTTCTTCTGCTCAGAACTTCATGATTGGTTCTCCAAAGGAGCCTAATAATGGAAGAAGAATAGAGATGTTCTCACCAGCATACTATGGTGCTTCTGCCATTGCAGGAGCTCTCTCCTGTGGCCTCACTCACACAGCAGTTACACCTCTTGACCTTGTCAAATGTAACATGCAGATTGATCCTTCTAAGTACAAGAGCATATCTTCTGGATTCGGAGTTTTGTACAGGGAACAAGGACTTAGGGGCTTTTTTAGGGGATGGGGACCTACCCTTTTAGGTTACCATGCACAAGGTGCCTTCAAATATGGACTCTATGAGTACTTCAAGAAATACTATTCTGATCTTGCTGGTCCTGAGTTTGCAACTAAGTATAAGACCTTGATCTACCTTGCCGGCTCGGCGTCTTCCGAGACCATTGCCGGGGTTGCACTCTGTCCCTTTGAGGCCGTCAAGGTTCGAGTTCAGACTCAGCCTGGCTTCGCCCGAGGACTCTCCGATGGCCTACCTAAGATCCTCAGAACTGAAGGAGTCTCAGGGCTGTACAAGGGACTTGTACCTCTATGGGGAAGACAGATTCCATATACAATGATGAAGTTTGCATCATATGAGAACACAGTGGAGATGATATACAAACATATGATCCCAACACCAAAGGAAGAAAGCAGTAAAATGGTGCAACTTGGTGTGAGTTTTGCAGGTGGATACATAGCTGGTATATTATGTGCCATTGTCTCTCATCCAGCAGACAACCTTGTCTCTTTCCTCAACAATGCTAAAGGGGCAACTGTTTCTGATGCTGTTAATAGACTTGGATTATGGGGACTAGCAACTCGTGGTTTGCCACTTCGGATATTCATGATTGGAACACTCACTGGATCTCAATGGCTCATTTATGATTCATGCAAAGTTGCTCTTGGCCTGCCAACTACCGGTGGTGCTGCTCCTGCTGCTGCTGCTCTTACTTCTGATTCTACAACTCAGAGGGCAATAGAAGTTGCTTGA 1116 0.4606 MAAVSVSDRGNHSSPSYLIPSFLYSSSSSSSLSSSLGGGSSAQNFMIGSPKEPNNGRRIEMFSPAYYGASAIAGALSCGLTHTAVTPLDLVKCNMQIDPSKYKSISSGFGVLYREQGLRGFFRGWGPTLLGYHAQGAFKYGLYEYFKKYYSDLAGPEFATKYKTLIYLAGSASSETIAGVALCPFEAVKVRVQTQPGFARGLSDGLPKILRTEGVSGLYKGLVPLWGRQIPYTMMKFASYENTVEMIYKHMIPTPKEESSKMVQLGVSFAGGYIAGILCAIVSHPADNLVSFLNNAKGATVSDAVNRLGLWGLATRGLPLRIFMIGTLTGSQWLIYDSCKVALGLPTTGGAAPAAAALTSDSTTQRAIEVA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90686g00007 371 FunFam Phosphate carrier protein, mitochondrial 65 343 - -
Stsc90686g00007 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 162 246 IPR018108 -
Stsc90686g00007 371 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 42 353 IPR044677 GO:0005315|GO:1990547
Stsc90686g00007 371 SUPERFAMILY Mitochondrial carrier 67 337 IPR023395 -
Stsc90686g00007 371 Gene3D Mitochondrial carrier domain 67 341 IPR023395 -
Stsc90686g00007 371 Pfam Mitochondrial carrier protein 165 250 IPR018108 -
Stsc90686g00007 371 Pfam Mitochondrial carrier protein 67 151 IPR018108 -
Stsc90686g00007 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 65 149 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90686g00007 Stsc-Chr90686 44104 46141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90686g00007 18 356 Chloroplast and Mitochondria Gene Families AT3G48850 70.621 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90686g00007 K15102 - sind:105165890 495.352