Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90685g00009 ATGCAGCAGAGCAATGCTGCAGCCGCCGCTCTTTATGACGGCGGCCGTGGCTCTCTGCACGGCGCGGGGAATGCAGCCACTGATGCCGGCGATGCGGTCATGGCGCGGTGGCTGCAATCTGCCGGGTTGCAGCATCTGGCCTCTCCCGTGGCTTCCACTGGAATCGATAATCGCCTCGTTCCAAACCTTCTCATGCAGGGTTACGGAGCGCAGTCTGCTGAAGAGAAGCAGAGGCTCTTTAAGTTAATGAGAAACCTCAATTTTAATGGAGAATCTGGTTCAGAGCCATATACCCCCACTGCCCAAATGTTAGGTGGAGTAGCTTTGTCAGATGGGCCTTACTCTCCTCCTGACTTCAGGGGGGATTTTGGAGCTGGCCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCAGAGGAAGTTCTGGCAGAATCTTTTGAGCCATCACCCTTATTGCCTGAAGATACTAGAATGTTTCAAGATGATTTCTATCCGGTTAACAGCAAACGGGAAATAGGAGAAGCAGATTTTGATGCATCAATTTCTTTGCCTATGAATGAATCAGATAATAGTACAAGGGAACATAATGTTGCGAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAACTTGCCAAGAATGAGGACGATGTTGTATCTGTATCTGATTATGCATATTTGACGGTTCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCACGATTTTTGTTTTGATGCTGTTTTTGATGAGAATGTTACCAATGATGAAGTATATCGAGATACAGTAGAACCAATTATTCCTACCATTTTTGAGCGAACCAAAGCTACCTGTTTTGCTTATGGTCAAACAGGAAGCGGCAAAACATACACAATGCAGCCATTACCTCTCAGAGCTGCTGAAGACCTTGTCCGGCATCTGCATCAACCATTGTATCGAAACCAGAATTTCAAACTGTGGCTTAGTTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTGGTGACCGAAAGAAACTTTTAATGAGGGAGGATGGAAGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCGGAGAATTCATTGAGAAAGGGAATGCTGCAAGAAGTACAGGATCGACTGGTGCTAATGAGGAGTCCTCTAGGTCACATGCTATCTTACAACTGGCTATAAAGAAGCACAAGGAGGTGAAGGAGGGCAAGCGGAACAACAATAAGAATGAAGAAAGAAGTGGGAAGCTTGTGGGAAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGCGCTGACACTACTGACAATGATCGTCAGACTCGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTGGCCTTGAAGGAGTGCATTCGTGCTCTTGACAATGACCAGATCCACATTCCATTTCGAGGAAGTAAACTTACTGAGGTGCTTCGGGACTCCTTTGTAGGCAACTCAAAGACTGTTATGATCTCTTGTATATCCCCAGGTGCGGGATCTTGCGAACACACGCTTAACACCTTAAGATATGCTGATCGGGTTAAAAGTCTATCCAAAAGTGGAAATCCCAGAAAAGATCAGCCCCCAAATCCAGCACCACAGGCTAATAAGGAGGTTTCATCCACATCTACATCATCCCTTCCAGCAGGTGCTGGTTCAGAAAACTTTTATGATCAACGTGAAGTGAAAGCAATGGATATTGGCAGGAAATTTGTTGACAAGGAAAGTTCTTTCTACAGCTCTGCCGCTGATGTTGACATAGACCTTGTCAATGGACGAGAGGAAAAAGTCTTAGGTTCTGCCTTAATGGACAAGGAGAGGTTTGAATTGAAGAACTCATGCAATGGTTCTACCAGTCAAAATGTGAACTCTTATTCACAAAATGATAATGATGAAAGAATGCAAAAGGTTCCTTCACCACAAAGAAAAAGGTCTAGTGATATTGATAGGCCTGCAAACTTCATGAAAAGGGATTCCTATGGTTCTGATGTGCTCACCACTAGCTCTAAGCAGCAGAGCACAGAGAACTATAACACAATTGCCTCTGGATCCAGGCTCTATGAAGCAGAAACCTTTCCTGATAAGAATATCAGTGCAATACTTGAGGAGGAAGAAGCACTACTTGCTGCTCATAGGAAAGAAATTGAGGACACTATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCAGAAGTGGATAAGCCAGGAAGCCTTATTGACAACTATGTAACCCAATTGAGCTTTGTGCTTTCTCGAAAAGCAGCTAGCCTTGTGGGGCTTCAAGCTCGCCTCGCAAGATTCCAACATCGACTAAAAGAACAGGAGATACTAAGTAGAAAAAGAGTTCCTCGTCAATAG 2412 0.4362 MQQSNAAAAALYDGGRGSLHGAGNAATDAGDAVMARWLQSAGLQHLASPVASTGIDNRLVPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQMLGGVALSDGPYSPPDFRGDFGAGLLDLHAMDDTELLSEEVLAESFEPSPLLPEDTRMFQDDFYPVNSKREIGEADFDASISLPMNESDNSTREHNVAKIKVVVRKRPLNKKELAKNEDDVVSVSDYAYLTVHEPKLKVDLTAYVEKHDFCFDAVFDENVTNDEVYRDTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRHLHQPLYRNQNFKLWLSYFEIYGGKLFDLLGDRKKLLMREDGRQQVCIVGLQEFEVSDVQIVGEFIEKGNAARSTGSTGANEESSRSHAILQLAIKKHKEVKEGKRNNNKNEERSGKLVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQPPNPAPQANKEVSSTSTSSLPAGAGSENFYDQREVKAMDIGRKFVDKESSFYSSAADVDIDLVNGREEKVLGSALMDKERFELKNSCNGSTSQNVNSYSQNDNDERMQKVPSPQRKRSSDIDRPANFMKRDSYGSDVLTTSSKQQSTENYNTIASGSRLYEAETFPDKNISAILEEEEALLAAHRKEIEDTMEIVREEMKLLAEVDKPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90685g00009 803 PANTHER KINESIN-RELATED PROTEIN 6 27 800 IPR027640 GO:0003777|GO:0007018
Stsc90685g00009 803 MobiDBLite consensus disorder prediction 535 573 - -
Stsc90685g00009 803 Coils Coil 719 750 - -
Stsc90685g00009 803 ProSiteProfiles Kinesin motor domain profile. 201 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 PRINTS Kinesin heavy chain signature 392 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 PRINTS Kinesin heavy chain signature 435 453 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 PRINTS Kinesin heavy chain signature 282 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 Pfam Kinesin motor domain 207 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 Gene3D Kinesin motor domain 180 538 IPR036961 -
Stsc90685g00009 803 MobiDBLite consensus disorder prediction 551 570 - -
Stsc90685g00009 803 ProSitePatterns Kinesin motor domain signature. 434 445 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc90685g00009 803 SMART kinesin_4 199 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90685g00009 803 FunFam Kinesin-like protein 180 538 - -
Stsc90685g00009 803 Coils Coil 775 795 - -
Stsc90685g00009 803 Coils Coil 409 429 - -
Stsc90685g00009 803 MobiDBLite consensus disorder prediction 653 674 - -
Stsc90685g00009 803 CDD KISc_KIF2_like 201 533 - -
Stsc90685g00009 803 MobiDBLite consensus disorder prediction 630 689 - -
Stsc90685g00009 803 MobiDBLite consensus disorder prediction 630 652 - -
Stsc90685g00009 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 535 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90685g00009 Stsc-Chr90685 69145 75854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90685g00009 193 535 Calmodulin-binding Proteins AT5G65930 34.561 5.88e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90685g00009 K10393 - gmx:100778915 1217.6