Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90685g00008 ATGGATAAAGAGGAAGCACCACAACTTCCCAGAAGAACAAGAAGGTCTTCGGCTTCACCTTGGGCGTCGACTTCAAATGATGTATCTTCTGCAAAAGTGAATAGCCTTGAACCTCTAACAATCAATGACCTCTTAGTTGGAGGGGACCCCATTAGCCTAGATGACTTGATTTCTAATTTTCCAGGTAGATGTGACCAGATTATCGAGATTGTGCGCCTTTTGGGACCATTGAACACTCCTATGCTTCCTTTGTTTGTGTATGGAGGTGCTTCCACAGGAAAAACCAGTATCATCCTTCAATTATTCAGGCATCTCAACAGGCCTCTTGTTTATTCTAGCTGCAGGACATGTTATAATCTGCGAATCTTGTTTGAATCGATTCTAAATCAGCTGCATCTCCATAGAAGAAGTGCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCAGATTTTGTTAATTTTCTTCGGGAGGCATTGACAAATGTCATAAACAATCTAAAGGAGAAGTCTGAGAAGTTGATTTCAAGCAAGACGATGCAAGGGGGAATTGGAAACATGATCTACCTGGTATTCGACAATTTTCAGCTTGTTAGGGAGTGGGACAAGAGCTCTACTATATTGCCCTTGTTGTTTAATCTTTATGATTTGTTGAAGATGCCTGAGGTGGGTCTGATTTTTATCAGCAATACTTCTCCAGATACCTTTTACTCTAACATGGGTTATGTGGAACCTATCCCCGTGTACTTTCCTGATTATGCAGAAGATGATATTCGTAAAATATTGTTGAGAAACCAAGCGAACCCGAAGCTATATTCCTCATTTCTCGATGTAGCTTTAAGGCCTTTCTTTAGGGTTACTAGGCATATTGATGAATTGTCCACTGCCTTCAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAAAGCATCATTCCTAATGAAGACATGAAGAGAAGGCTATTCAGTCATATAAAGCTTCATGTTTCCTCCTCTCTAAATGAGATCTTTAAGGTTTCATCTCTTCCTGGGTCCAAAGTCGAGAGCTCTAAAGAGACAACACAGAAGGGGAAAACAAGGAATTTGGAGCGTTCGNNNNNNNNNNATTTTCACATGTCTACTAGTGCAAAATATCTCCTTATTTCAGCATTTCTTGCTTCCAGAAACCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTGATAACCGAAAACGAAAGAGGAAGCCCTCTGAGAAGGTGCCAGAAAAGAAGGAAATTCTAGAAGAGGAGCTACTGCTGAAAGGACCTGGAAGTTTCCCATTGGAGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCAGTCGCAGAAGATCCATCTGATGAGGACGAACAAAATGGTTTTGGATTAGGAGTCGAAGGTGGCTGTGGCAGCTTGATGTCTGATGTTCTCTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTTAAAGGAAGAAGCTGTCCGATTGAAGGCTCAACTCGGTATCGGTCAAGTATATCAGAAGACTTAGCTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCTTTATCAAGTTACTTGTACAAAAGAACCTAG 1617 0.4063 MDKEEAPQLPRRTRRSSASPWASTSNDVSSAKVNSLEPLTINDLLVGGDPISLDDLISNFPGRCDQIIEIVRLLGPLNTPMLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNLRILFESILNQLHLHRRSAANGYSNAKRCERPSDFVNFLREALTNVINNLKEKSEKLISSKTMQGGIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLKMPEVGLIFISNTSPDTFYSNMGYVEPIPVYFPDYAEDDIRKILLRNQANPKLYSSFLDVALRPFFRVTRHIDELSTAFKPLYEKYCEPLSDKSIIPNEDMKRRLFSHIKLHVSSSLNEIFKVSSLPGSKVESSKETTQKGKTRNLERSXXXXFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVPEKKEILEEELLLKGPGSFPLERLLAIFQCIVSVAEDPSDEDEQNGFGLGVEGGCGSLMSDVLLQLSSLCNAKFIFKGRSCPIEGSTRYRSSISEDLALKVARSLKFPLSSYLYKRT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90685g00008 538 FunFam Origin of replication complex subunit 5 60 241 - -
Stsc90685g00008 538 MobiDBLite consensus disorder prediction 1 26 - -
Stsc90685g00008 538 MobiDBLite consensus disorder prediction 400 422 - -
Stsc90685g00008 538 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 534 IPR047088 -
Stsc90685g00008 538 Coils Coil 155 179 - -
Stsc90685g00008 538 Gene3D - 60 241 IPR027417 -
Stsc90685g00008 538 MobiDBLite consensus disorder prediction 12 26 - -
Stsc90685g00008 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 272 IPR027417 -
Stsc90685g00008 538 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 536 IPR020796 GO:0000808|GO:0005634|GO:0006260
Stsc90685g00008 538 MobiDBLite consensus disorder prediction 405 422 - -
Stsc90685g00008 538 Pfam AAA ATPase domain 59 222 IPR041664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90685g00008 Stsc-Chr90685 65523 68406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90685g00008 3 537 Core DNA Replication Machinery Family AT4G29910 59.630 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90685g00008 K02607 - gmx:100782175 827.394