Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90685g00006 ATGGACCCTAGTGGATCATACCCAGTCTCAGGAGTCGGAACTACCCAAATGAAAATGACGATTCGCCCCTCCCATTCCCACCACCACTCTGAGACCACCAACACCGACCGCGCACTCGACTGCAACCTCACCTCCCTCTGCGACCACATCCAATCCGAAGGCTTCAACTCCGGCGCCTTCTCCGACATCCTCCTCCACGCCCTTGGCTCCACCTTCCGCCTCCACCGCCTCCTCCTCTCCCGCAGCTCCTATTTCCGGAACATGCTTCATGGACCTTGGAAGGAAGCTTCTGCACCGGTTGTGACTTTGCACGTCGACGATAAAAACGTTAACGAAGAAGCCATTACTATGGCTTTGGCTTATCTCTATGGTCACCACCCTAAGCTTAACGATAACAATGCTTTTCGTGTTCTCGCTGCTGCTTCCTTCCTTGACCTTCAGGATTTGTGTGCAATATGTACGGACTTCATTATATCGGAGCTTTGGACTTCTAATTTCTTGGCTTACCAGGTGTTTGCTGAGAACCAAGACTATGGCATCCATGGGGAGCGTGTAAGAAATGCTTGTTGGGGCTACCTATGTCAAAGCGGTGGCATGGAATTAAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTGCATGCGTTACTGACCAGTGATGAACTATGGATACCAAGTGAAGAGAAAAGGTTTGAGTTGGCTTTGTATGTGTTCCTCGCAAAAAGTGCTCAGTGGAAGGCCAAACATCCTGAACAAGGAAGTTCCAATTCTGAGTCTGGAACTGATATTCATTCCGATTCTGATCACTCAAAGGGGAAGAGTATATCTGACGGCTGCACTGATAAGAGGTTGGAAACTGATCTAGAGCAAATGAGTCTTAAAAGTAATCTAAACGATCCTAATGGCCGTAGTCTTATAGTTGAGCTGCCAGACTTCAACAATGCAGCTTCTAATTCCAATCAACAAAGTGAAGAAGCTTCATATACCAGCTCATCGAACCTGAAACCAACATACTCTTGCAACATGGAAGGGCCTTCGTCAATGGGTGACTCATTATCTGATACAGATGGCAGCAGAACATCATGTTCCTATGTTGAGATGCCTGTTGTTGCTGGAGTAAATGGAGTGGCTATGGAAGGGCCTTCTGAGGAAGGATCTTGCTACCATTTGGATAACAATAGTTGGATTGTTAGGGATCAATCTAGAAACCGTTTTTCATCAAATTCTTCTTCTAGCGGGGTGTCATCCAGTGATTGGGGAAGATATGGAGCACCATTTTTTTCATGGGGTGGAAGAGTTGTTGGCAAAAGACGGCTTGAAGCTCACTCCAAAAGAAACTATGCAGATAATGGGGATGAATATGAAGCATTTTTAAACATATTTGAAGGGGGCTCTCTCTTATACTGCAATATGTCTTTTGAGGCTCTTTTGAATGTCAGAAAGCAACTTGAAGAGTTAGGTTTCCCTTGTAAAGCTGTGAATGATGGTCTTTGGCTTCAGATGCTTCTAAGTCAGAGGGTGCAAGAAATTGCTGCTGATACCTGTAAGTCTTGTTCCCTTATGAGTATGGCTTGCACTTGCCGGCAACCGTTCACATTTTCACATGGGGCTAATTCTACTGGGTTTTACATGCAAGAACATAACCAGAATAATATGCCTGGGAATATGGGCAATATATATGTTGCTGAGCCTTCTCCAGGTGAAGGAAATGGCATCTTTAGACCCGTACGAGTACATGTTAGAGGGGCTATAGATGGCCTTGCAGGTATTGGTCGTGGAACTACCTTTGTTCCAGCAGCTGCTTCTCCTCCCACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGGAACAGAAACTACCAGCAATCTGCCGCCAATGATGATTCAGAGATGCGAACTGATCACAATGGTGACCTGTCTGGAGATGGATTGACAGCATTGGTCGGATTAAGTCAAGGTGGTGGTAATGGAGCAAATGTACACGGAGAACTTTCTCAAAGGGGATATGAAATGGAAATGCAAGGCAGAATGTCTGGAACTGCTGGAGGTCCAAGTACTGGTGGTATTCCTATGCAGATGTTAGAGACACCAGAACATAGCAGTGGAGTAGAATGGGAGAATTCCAATAATTCATCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGGGTACAATTTGAGGATGTGCACAGACTTGGTGATGGCCAGGTTAAGCATTCTCCAGAAATGTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAGGCTTTTAATGATGAGGACCCTCAGGGAAGACGTACACTGGGGTTGTTTCTTCATCGTCGGAAGGCAGAGATAACTGATATACATAAAAAGGTGCACATGTATGTTGACTCTCGTGAAAAGGTGACTGCTCGCTATCAGTTGATATGTCCATCCAAGAGGGAGGTGATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGTTATTTGACGAGCTTGCTGATCTTCTCCAAAATGGAGCCCTAAGGGTCATTGCTGTGGTGCAGCTCGTTTGA 2604 0.4539 MDPSGSYPVSGVGTTQMKMTIRPSHSHHHSETTNTDRALDCNLTSLCDHIQSEGFNSGAFSDILLHALGSTFRLHRLLLSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNEEAITMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALYVFLAKSAQWKAKHPEQGSSNSESGTDIHSDSDHSKGKSISDGCTDKRLETDLEQMSLKSNLNDPNGRSLIVELPDFNNAASNSNQQSEEASYTSSSNLKPTYSCNMEGPSSMGDSLSDTDGSRTSCSYVEMPVVAGVNGVAMEGPSEEGSCYHLDNNSWIVRDQSRNRFSSNSSSSGVSSSDWGRYGAPFFSWGGRVVGKRRLEAHSKRNYADNGDEYEAFLNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCSLMSMACTCRQPFTFSHGANSTGFYMQEHNQNNMPGNMGNIYVAEPSPGEGNGIFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYQQSAANDDSEMRTDHNGDLSGDGLTALVGLSQGGGNGANVHGELSQRGYEMEMQGRMSGTAGGPSTGGIPMQMLETPEHSSGVEWENSNNSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEMFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHKKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90685g00006 867 Gene3D Potassium Channel Kv1.1; Chain A 28 194 IPR011333 -
Stsc90685g00006 867 SMART BTB_4 61 161 IPR000210 GO:0005515
Stsc90685g00006 867 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 15 867 - -
Stsc90685g00006 867 MobiDBLite consensus disorder prediction 314 359 - -
Stsc90685g00006 867 SUPERFAMILY POZ domain 53 159 IPR011333 -
Stsc90685g00006 867 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
Stsc90685g00006 867 MobiDBLite consensus disorder prediction 249 279 - -
Stsc90685g00006 867 MobiDBLite consensus disorder prediction 262 279 - -
Stsc90685g00006 867 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90685g00006 Stsc-Chr90685 45853 51096 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc90685g00006 BTB 1.1e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90685g00006 - - gmx:100806711 1344.33