Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90685g00003 ATGCTTGGTCCTGAAGCAGAACTTAAGATAAGTTTCGGTTACCAATGCAATGGCGTTGCAGATATCTCATGCAAGTATATCAACGGCTACAAACTCCTTCCTTATTTCCCCAGAACCAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCGTAAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATTGGGGAAGAAATCCTTCCTAGTTTGGATTCTCCTACGTCGTTTCGTAAGGTGCCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTGTCATCTTCTCTCCCTAGTAGTTTGTCAAACCTCAGTTGCAGTCCATCCGCACAAAGTGATATGATTGATTACGACTCTTGTACAACTAGTGCTCCTTGCAAAAGCGAAGGATTTCTCAATGCTACTGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGGGTTCAAGCAATTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGCAGGGACGCAGCTGACTTTTTGGCCTGTACCCTTTATGACACTATAATATCTCATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCCATCAAAGCTTCCAACAGTCTTGATTTGGGTGGATCATTTCAATACGAGTTGGATGAGCATCAATCTCCTTCTCAGAAATCATTTTCACATGGTATTCTTGATAGCCTCCAACGTGCTCTCAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAAGAAATGGAGGACCGTCCGGATTTAGTTTCTGTTGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAACATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTAGCAACATGCGGTGAGGATGGCAAAATAAATGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACGGATATTCACACCGTTGACAATGGAGCTGAAAGAGCTCAACTTCTTTCTGGTCACCCCGATGATCCTAAGGCCATTGTAGCTGGGAAAGTGAAAGGAAAACTGAAGGTTACCCGCGCATTCGGAGTTGGGTACTTGAAAAAGAAAATTTTGAATGATGCATTGATGGGAATCCTTCGAGTGCGTGATCTCATAAGCCCGCCATACATTTCGACTCAACCGTCACTAAACGTGCATAAAATCTCGAGTTCCGATCAATTTGTTATAGTTGCAAGTGATGGTTTGTTTGATTTCTTCAGCAATGATGAAGCAGTAAAGCTCGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTGAGCACAGAAGAGTTGATGAATATTCCGGCTGGGAGGAGGAGAAAGTATCACGATGACGTGACCGTGATTGTGATAATCCTTGGGATGAATCAACGGACTTCAAAGGCATCAACTTGCATCTAA 1476 0.4282 MLGPEAELKISFGYQCNGVADISCKYINGYKLLPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPTSFRKVPSSPSLSKLDILSSSLPSSLSNLSCSPSAQSDMIDYDSCTTSAPCKSEGFLNATEVQVAGGAAGEDRVQAICSEENGWLFCAIYDGFNGRDAADFLACTLYDTIISHFNMLYLDLESDSIKASNSLDLGGSFQYELDEHQSPSQKSFSHGILDSLQRALSQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGEHLYTLNLGDSRAVLATCGEDGKINGKERRMKAIQLTDIHTVDNGAERAQLLSGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISTQPSLNVHKISSSDQFVIVASDGLFDFFSNDEAVKLAESYILSNPFGDPAKFLVEQLIARAADSAGLSTEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90685g00003 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
Stsc90685g00003 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
Stsc90685g00003 491 Pfam Protein phosphatase 2C 226 432 IPR001932 -
Stsc90685g00003 491 CDD PP2Cc 146 478 IPR001932 -
Stsc90685g00003 491 Gene3D - 109 487 IPR036457 -
Stsc90685g00003 491 SMART PP2C_4 124 476 IPR001932 -
Stsc90685g00003 491 PANTHER PROTEIN PHOSPHATASE 2C 139 476 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90685g00003 Stsc-Chr90685 18279 21654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90685g00003 4 491 PP2C-type Phosphatase Gene Family AT3G16560 62.525 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90685g00003 - - gmx:102666789 712.22