Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90684g00010 ATGCGGTGGAGCCGCCACTCTCTGTTCCTCTTATGCTTCCATTTCTTATTCCTTCGCTCCGCCGTCACCATCACCACCACCATCAACCTCTCTTCCCCTTTCTCTCCCTCAGAAAACGTCACTCTCTACGGCGACGCCTTCTTCACCGACCACTCCATCACCCTCACCACCGACCAATTCTCCTGCTCCCAGCCTCCTTCTTCTTCTTCTGGTGTTGGAAGAGCTTTCTACGTTTACCCCGTTCGCTTTCTTGATCCCCAAACTAACTCCACCGTTTCGTTCACCTCCCGATTCTCGTTCTCCATCTCCTCCTCCGCTTCTTGCCCCTCCCCCGACGGCGTCGCCTTCCTCATCTCCTCCAACACCGACTTCGGAACCCTCTCTCGCGGTTACTTAGGCCTCCCTGCCGCCATTCTCGACCAACCGCAGCACCAAGACTCTTTCTTCGCCGTCGAATTCGACACGAGCTTCGACCCTGCGCTCGGCGACATCAACGATAATCACGTCGGAGTTGATCTCAACAGCATCGTTTCTTTTGCCTCCGTTGACACTCTGTCTCGCGGCGTTGACCTCAAGAGCGGGAAAGCCATCAATGTGTGGATTGAGTATAGGGATTCCATGAAGATGGTTCGTGTTTGGGTTTCTTATTCTTCAACTCGGCCTCCTTCTCCGATTCTTGCTTCCCAGATGGATCTTTCTGAGCAACTCAAGGAGTTCATGCATGTTGGATTCTCTGCTTCCAATGGTGGAGGTTCAGCTGTTCATGTTATTGATCATTGGCAATTCAAGACTTTTGATTATGGCTCTCGTGAAGATGTTACTCCTATGGATACTGTTGAAGAAGGGAACTGTGTCTTTTGTTATCCCGGGGAGCTTGATTTGGATTCTGCTTCGTCCGTTCAGCGAAACGGCACGCGTCGGAGGAGGCAGCAGAAGATTAGTGAGATGGCTCTTGGATTGGGAGGGATAACTGCTTTTCTGGTTTCTGTAGTGGCTGCAGGTTTTGTTATCTCAATTTTCTTGTCAAAGAAGAAAAGTAATGGTAATGGAAAGAAAAATTGTAGGTTTCAGACAACTAAAGTGCCTATGAGATTGTCGCTTTCTGAGATCAAATCTGCTACAATGGGGTTTAATCGTGATAGGCTTGTTGGTGAAGGTGCTTCAGCAAAGGTTTACAAAGGGTCACTTCAATGTGGATTAGATATTGCAGTGAAGAGGTTTGGCAATGTTGATGGTTTGGATTGTTTGCACAATCCTTTCGCCACCGAGTTCGCCACCATGGTGAGTTACTTGAGGCACAAGAATTTGGTTCAGCTTAAGGGATGGTGCTGTGAGGGGAATGAGTTGCTTTTGGTTTATGAGTACTTACCAAATGGCAGCCTCAACAAGGTTCTCCATAGGAACTTCAATTCTTCAATTGTCTTGACATGGAAGCAAAGGGTTAATATCGTTCTCGGTGTTGCTTCTGCTCTTACCTATCTCCATGAAGAATGTGAGAGGCAAATCATTCACAGAGATGTGAAGACTTGCAACATAATGCTTGATACAGACTTCAATGCAAAGCTTGGGGATTTTGGACTTGCTGAAGTGTATGAGCATAGTTCTAGCACAAGGGATGCTACCATACCAGCAGGAACAATGGGTTACCTTGCACCGGAATATGTGTACTCCGGCGTTCCTACGGTGAAGACTGATGTTTACAGCTTTGGTGTGGTGGTGTTGGAGGTGGCTACAGGGAGGAAGCCAGTGGAGGATGACGGAACCGTGATGGAGAGGATGCTGTTGGTGGGGCTTGTTTGTGTTCATCCTGATTATGAGAGGAGGCCAAGGGTGAGAGATGCAGCTAGAATTCTCAAGAAAGAAGCACCACTTCCATCATTGCCATTGGCTAAGCCTAGGGTGAGAATTAGGCCTGTTTGTCCAAATGATACACCAGAGACACAGAATGCTGTTGTTGGGGATTGGTTTAGTAATGATGATGCTCCTTATTTGACTCCTGGGAGCCAGTTTTACTAG 2016 0.4787 MRWSRHSLFLLCFHFLFLRSAVTITTTINLSSPFSPSENVTLYGDAFFTDHSITLTTDQFSCSQPPSSSSGVGRAFYVYPVRFLDPQTNSTVSFTSRFSFSISSSASCPSPDGVAFLISSNTDFGTLSRGYLGLPAAILDQPQHQDSFFAVEFDTSFDPALGDINDNHVGVDLNSIVSFASVDTLSRGVDLKSGKAINVWIEYRDSMKMVRVWVSYSSTRPPSPILASQMDLSEQLKEFMHVGFSASNGGGSAVHVIDHWQFKTFDYGSREDVTPMDTVEEGNCVFCYPGELDLDSASSVQRNGTRRRRQQKISEMALGLGGITAFLVSVVAAGFVISIFLSKKKSNGNGKKNCRFQTTKVPMRLSLSEIKSATMGFNRDRLVGEGASAKVYKGSLQCGLDIAVKRFGNVDGLDCLHNPFATEFATMVSYLRHKNLVQLKGWCCEGNELLLVYEYLPNGSLNKVLHRNFNSSIVLTWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDTDFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVMERMLLVGLVCVHPDYERRPRVRDAARILKKEAPLPSLPLAKPRVRIRPVCPNDTPETQNAVVGDWFSNDDAPYLTPGSQFY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90684g00010 671 FunFam Lectin-domain containing receptor kinase A4.3 456 589 - -
Stsc90684g00010 671 SUPERFAMILY Protein kinase-like (PK-like) 355 618 IPR011009 -
Stsc90684g00010 671 FunFam L-type lectin-domain containing receptor kinase S.6 343 455 - -
Stsc90684g00010 671 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Stsc90684g00010 671 CDD lectin_legume_LecRK_Arcelin_ConA 34 265 IPR001220 GO:0030246
Stsc90684g00010 671 Gene3D - 29 277 - -
Stsc90684g00010 671 Gene3D Phosphorylase Kinase; domain 1 337 455 - -
Stsc90684g00010 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Stsc90684g00010 671 Gene3D Transferase(Phosphotransferase) domain 1 456 623 - -
Stsc90684g00010 671 SMART serkin_6 377 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90684g00010 671 Pfam Protein kinase domain 378 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90684g00010 671 PANTHER - 57 625 - -
Stsc90684g00010 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 264 IPR013320 -
Stsc90684g00010 671 Pfam Legume lectin domain 34 265 IPR001220 GO:0030246
Stsc90684g00010 671 ProSiteProfiles Protein kinase domain profile. 377 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90684g00010 Stsc-Chr90684 81017 83152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90684g00010 4 670 Receptor kinase-like Gene Family AT5G42120 52.661 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc90684g00010 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90684g00010 - - gmx:100783805 889.412