Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90684g00007 ATGGAGAGTTTCTGGAGCATGTTTTGTGGGGAATCTGGTTGTTCAGGAAATCCTCATTGCAGTTACGATTTCAAGTTTTTGAAAGATCCTTCCTCATGTATCAACCATTTTCTGATCATATGCATTGATGTGTTGCTTCTCATCATGATCTCATCAATCACCATGTTTCACAAGCCCTCTCCATTGAAAAAGCAGCATCACCATGGCCTAGTCCAGGGGCAAAGCTATTCAGCATTGCAGCTAGTTTCTGCCATAGCCAATGGCTCTTTGGGCTTGGTACATTTGATCTCAGGATTCTGGTTCCTGGAAGAGAATCTGAGAAAAACCAGAAGTGTTTTGCCCCTTGATTGGTGGTTTCTTGAATTCATTCAAGGGTTAACATGGTTGTTGGTAGGATTAACCATGAGTCTTAGGGTGAAAGAACTTCCAAGAACATGGCTAAGGCTGATTTCTGTTCTTATGTTCTTGATTTCTGGAATTCTTTGTGCTTTGTCCTTGTTCTATGCAGTTAGTAGCAGAGGATTTTCCCTTAAATTTTCTCTAGATGTTCTATCTTTTAGCGGCGCGATTTTATTGCTACTATGCAGTTACAAGGAATCTAAGCATAGAGACACTGATGGAGAAGAAAACCATGAAAGCCTTTACATGCCTTTGAATGATGAATCCATGTCCAACTCAATTGATTCTGATTCTGATTCTGTTAGCTCTGTCACCCCATTTTCCGGAGCCGGAATCTTCAGTTGGATGTTATTTTGGTGGTTGAATCCATTGATGAAAAGAGGAAAACAGAAAACACTTGAGGAACAAGACATTCCGAAGCTGCGAGAAGCCGACCGAGCAGAAAGTTGTTACTTGCAGTTTCAAGAAGAACTGAACAAGCAGAAGATGAAAGAACCATCATCAGCACAGCAGCCATCACTCTTGAGGACAATAATCATGTGCCATTGGAAAGAGATTCTGATCTCAGGATTCTTTGCATTGCTTAAGGTGATAACTCTCTCTTGTGGACCTCTCCTTCTAGATTCCTTCATACTTGTTGCTGAGGGTAATGAGAGTTTCAAACATGAAGGTTATGTATTGGCCATATCATTGGTCATTACAAAGATCATAGAATCTTTATCTCAAAGGCAATGGTACTTCAGGACCAGGCTAATTGGTTTGAAAGTTAGATCACTGCTTATTGCAGCTATTTACAAGAAGCAACTGAGATTATCCAATGCTGCTAGATTGAATCATTCTGGTGGTGAGATCATGAACTATGTGAATGTTGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACATGGACCACCAGTGTTCAGCTTTGTATCGCCTTAGTAGTACTCTTTCGCGCCGTTGGGCTCGCCACGTTTGCTTCATTGGCAGTGATACTTCTCACTGTGCTTTGCAACACTCCACTTGCAAAGTTACAGCACAAGTTCCAGAGGAAACTCATGGTGGCGCAGGACGAGCGATTGAAGGCTACTTCTGAGGCTCTTGTGAATATGAAGGTGCTGAAGCTATATGCCTGGGAAACCAATTTCAGAAATGCCATTGAAAGATTGAGGAATGTTGAGCTCAAAAGACTTTCTGTTGTGCAACTGAGGAAGGCATATAGCAACTTTCTCTTTTGGGCCTCTCCTGTTTTGGTAACCATCCCTGATGTTATTGGGGTGGTGATCCAAGCAAAAGTTGCATTCTCAAGGATTGTGAAATTCCTTGAGGCACCTGAACTAGACAGCCAAAGTTTCAGGAAGAAGCATTTCAGTGAAAGCATGAGAGGTTCGATTTCAATCAAGTCTGCTGAGTTTTCATGGGAAGGTAATGCATCAAAACCAACTCTGAAGAACATAAATTTGGAGGTTAGAGCAGGCCAAAATGTGGCTATCTGTGGAGAAGTTGGATCTGGAAAATCAACCCTCTTAGCAGCAATTCTCAGAGAAGTTCCCATAACTCGCGGAACTATTGAAGTTTATGGGAAGTTTGCCTATGTTTCTCAAACGGCATGGATACAGACAGGTACAATAAGGGATAACATATTGTTTGGATCAGAAATGGATGCTGGAAAGTATCAAGAAACAATTCACAGGTCCTCACTTGTGAAGGACCTTGAGCTGTTTCCCCATGGTGATCTCACTGAGATAGGGGAGAGAGGAGTTAACCTGAGTGGAGGCCAGAAGCAACGGATTCAACTCGCTCGCGCTCTTTACCAGAATGCTGATATATATCTCCTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTGTTCAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTCACTCATCAAGTGGATTTTCTTCCAGCTTTTGATTCTGTTTTGTTGATGGCAGAGGGGAAAATCCTACAAGCTGCTCCTTATCACCATCTCTTGAACTCAAGACAAGAATTTCAAGATCTTGTCCAAGCTCACAAAGAAACCGCCGGATCGGACAGGCTCATGGATGCTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTAACAGACTTACAGACACTCCTGGGGAGATAAGGAAAACATATCCAGAGAATCAGCTGGAAACATCGCGTGGCGAAGGAGATCAATTGATCAAGCAAGAAGAAAGAGAAGTAGGAGACAGGGGATTCAAGCCATACTTACAGTATCTGAATCAAAACAAAGGATATGTGTACTTCACTGTAGCTGCACTTTCTCACCTCTCATTTGTGATTGGCCAGACACTGCAGAACTGGTGGATGGCTGATAAAGTTGATGATTCTAATGTCAGCACATTGCATCTGATTGTTGTCTACTTGATAATTGGATTTGCTTCAACATTTTTCTTGTTGATTAGAAGCCTTGTAGCAGTTGCTTTGGGCCTTCAATCATCAAAATCTATGTTCTTACAGCTACTGAATTCCCTTTTCCGCGCACCGGTGTCCTTTTATGACTCCACACCATTAGGAAGAATTCTTAGCAGAGTCTCTTCTGATCTTAGCATTGTTGATCTTGATGTTCCATTTAGCCTTGTTTTCGCAGTAGGAGCTACTAACACTTGCTATGCCAATCTTATAGTCTTAGCAGTGATTACTTGGCAAGTGTTGTGTGTCTCTATACCAATGATTTATATAGCAATTCGCTTGCAGAGCTACTACTTTGCTACTGCAAAAGAATTGATGAGGATGAATGGCACAACAAAATCCTATGTAGCCAATCATCTAGCCGAATCTGTAGCCGGGGCTGCGACGATAAGGGCTTTCGAGGAAGAACACCGGTTTTTCGTGAAGAATCTTGACCTCATTGATGTGAATGCAAGCCCTTTCTTCCACAGTTTTGCAGCAAATGAGTGGCTGATGCTAAGGTTAGAAACAATCAGTGCAGTTGTTTTTGCAGCAGCAGCACTTTCCATGGTGATGCTTCCACCAGGAACTTTCACCTCAGGATTCATTGGCATGGCTCTATCATATGGACTTTCATTGAACTCTTCCCTAGTATTTGCAATCCAAAATCAATGCACTGTAGCAAACCAGATAATATCAGTGGAGAGGCTAAACCAGTACATGTATATAGAAAGTGAGGCTCCTGAAGTTATTCAAGAAAATCGCCCTCCTCCTAATTGGCCTCTTAAGGGAAAAGTTGACATACATAATTTGAAGATAAGGTACAGGGAAAGTGCACCACTAGTACTACGTGGAATCACATGCACGTTTGAAGGAGGAGACAAGATTGGAATAGTTGGAAGAACAGGTAGTGGAAAATCAACATTGATAGGTGCATTGTTCCGTTTGGTGGAGCCAGCAGGTGGAAGGATCATAGTAGATGGCATTGATATTTGTTCAATTGGACTCCATGATTTGAGGTCACGTTTTGGTATCATACCTCAGGATCCTACTCTCTTCAATGGCACAGTTAGATACAATTTGGACCCCTTATCTCACCACTCTGATCATGACATTTGGGAGGTTCTTGGTAAGTGTCAGTTAAGGGAAGTTGTGAAAGAGAAAGAAGAAGGGTTAGACTCATCGGTTGTTGAAGCTGGGGCAAACTGGAGCATGGGACAAAGGCAATTGTTCTGTTTGGGGCGTGCTCTTCTGAGGAGAAGTAAGATCTTAGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACAATTAGAACAGAGTTTGCAGATTGTACTGTCATCACAGTAGCACATAGGATTCCAACTGTCATGGATTGCACTAAGGTCGCTGCTATCAGTGATGGAAAACTGGTTGAGTATGATGAGCCGATGAAGTTGATGAAGGATGAAGGATCATTGTTTGGACAGCTTGTTAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCACTGA 4416 0.4203 MESFWSMFCGESGCSGNPHCSYDFKFLKDPSSCINHFLIICIDVLLLIMISSITMFHKPSPLKKQHHHGLVQGQSYSALQLVSAIANGSLGLVHLISGFWFLEENLRKTRSVLPLDWWFLEFIQGLTWLLVGLTMSLRVKELPRTWLRLISVLMFLISGILCALSLFYAVSSRGFSLKFSLDVLSFSGAILLLLCSYKESKHRDTDGEENHESLYMPLNDESMSNSIDSDSDSVSSVTPFSGAGIFSWMLFWWLNPLMKRGKQKTLEEQDIPKLREADRAESCYLQFQEELNKQKMKEPSSAQQPSLLRTIIMCHWKEILISGFFALLKVITLSCGPLLLDSFILVAEGNESFKHEGYVLAISLVITKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYKKQLRLSNAARLNHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVILLTVLCNTPLAKLQHKFQRKLMVAQDERLKATSEALVNMKVLKLYAWETNFRNAIERLRNVELKRLSVVQLRKAYSNFLFWASPVLVTIPDVIGVVIQAKVAFSRIVKFLEAPELDSQSFRKKHFSESMRGSISIKSAEFSWEGNASKPTLKNINLEVRAGQNVAICGEVGSGKSTLLAAILREVPITRGTIEVYGKFAYVSQTAWIQTGTIRDNILFGSEMDAGKYQETIHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMAEGKILQAAPYHHLLNSRQEFQDLVQAHKETAGSDRLMDATTSSSSSSSSSSSSSSFNRLTDTPGEIRKTYPENQLETSRGEGDQLIKQEEREVGDRGFKPYLQYLNQNKGYVYFTVAALSHLSFVIGQTLQNWWMADKVDDSNVSTLHLIVVYLIIGFASTFFLLIRSLVAVALGLQSSKSMFLQLLNSLFRAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATNTCYANLIVLAVITWQVLCVSIPMIYIAIRLQSYYFATAKELMRMNGTTKSYVANHLAESVAGAATIRAFEEEHRFFVKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAAALSMVMLPPGTFTSGFIGMALSYGLSLNSSLVFAIQNQCTVANQIISVERLNQYMYIESEAPEVIQENRPPPNWPLKGKVDIHNLKIRYRESAPLVLRGITCTFEGGDKIGIVGRTGSGKSTLIGALFRLVEPAGGRIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSHHSDHDIWEVLGKCQLREVVKEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGKLVEYDEPMKLMKDEGSLFGQLVKEYWSHFQSAESH 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90684g00007 1471 Gene3D - 1208 1460 IPR027417 -
Stsc90684g00007 1471 FunFam ABC transporter C family member 10 583 836 - -
Stsc90684g00007 1471 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 241 1459 - -
Stsc90684g00007 1471 Pfam ABC transporter 1242 1390 IPR003439 GO:0005524
Stsc90684g00007 1471 CDD ABC_6TM_ABCC_D2 907 1200 IPR044726 GO:0140359
Stsc90684g00007 1471 FunFam ABC transporter C family member 3 1208 1460 - -
Stsc90684g00007 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 823 IPR003439 GO:0005524
Stsc90684g00007 1471 CDD ABCC_MRP_domain1 600 800 - -
Stsc90684g00007 1471 CDD ABCC_MRP_domain2 1223 1443 - -
Stsc90684g00007 1471 MobiDBLite consensus disorder prediction 832 859 - -
Stsc90684g00007 1471 MobiDBLite consensus disorder prediction 828 886 - -
Stsc90684g00007 1471 CDD ABC_6TM_ABCC_D1 321 573 IPR044746 GO:0140359
Stsc90684g00007 1471 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524|GO:0016887
Stsc90684g00007 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1459 IPR003439 GO:0005524
Stsc90684g00007 1471 Gene3D - 569 845 IPR027417 -
Stsc90684g00007 1471 FunFam ABC transporter C family member 10 303 556 - -
Stsc90684g00007 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1214 1452 IPR027417 -
Stsc90684g00007 1471 SUPERFAMILY ABC transporter transmembrane region 911 1208 IPR036640 GO:0005524|GO:0016020
Stsc90684g00007 1471 SMART AAA_5 627 800 IPR003593 GO:0016887
Stsc90684g00007 1471 SMART AAA_5 1251 1443 IPR003593 GO:0016887
Stsc90684g00007 1471 Gene3D ABC transporter type 1, transmembrane domain 264 560 IPR036640 GO:0005524|GO:0016020
Stsc90684g00007 1471 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 556 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00007 1471 FunFam ABC transporter C family member 5 874 1206 - -
Stsc90684g00007 1471 Pfam ABC transporter transmembrane region 320 553 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00007 1471 Pfam ABC transporter transmembrane region 919 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00007 1471 Gene3D ABC transporter type 1, transmembrane domain 873 1206 IPR036640 GO:0005524|GO:0016020
Stsc90684g00007 1471 Pfam ABC transporter 618 752 IPR003439 GO:0005524
Stsc90684g00007 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 823 IPR027417 -
Stsc90684g00007 1471 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1188 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00007 1471 SUPERFAMILY ABC transporter transmembrane region 308 555 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90684g00007 Stsc-Chr90684 53720 60831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90684g00007 594 852 Calmodulin-binding Proteins AT2G36910 29.856 4.60e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90684g00007 K05666 - gmx:100784336 2302.32