Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90684g00006 ATGGAGGGGTTTTGGAGCCTATTCTGTGGAGAAGAAACTGGTTGTTCAGAAGCAACAGGAAAGCCATGCAGTTATGATTTCAAGTTTTTGATTGATCCTTCCTCATGCATCAACCACTTCTTGATATCTTGCTTTGATGTGTTGCTTCTTCTCATGCTGCTATTCATTATGATCAACAAGTCACCCTCCAAACCATTACACGGTCTAACACGGTCTCGAAGACATTCAAAACTGCACCTAGTCTCTGCCATAGCCAGTGGTGCTCTTGGCCTGGTGCATTTGTGCTTAGGCATTTGGGTTTTAGTGGAGAATCTGAGCAAAACCCACACTTCTTTGCCCCTTGATCTGTGGTTGCTGGAATTCTTTCAAGGATTGACATGGTTGTCAGTGAGCATAGCAATAATTCTTGGCCTAAAACAGCTTCCAAGACCATGGTTAAGAACGTTCTCTGTTCTTATCTTCTTGGTTTCTAGCATTTCCTGTGCTTTTTCCTTGTTTTATGTAATTGGTAGCAAAGACTTGTCCCTTAAGGTAGTTCTAGATATTCTATCTTTACCAGGGGCAACATTATTGTTACTATGCACATATAAATGCAGGGAAACTGATATGGAACTTGATGAAAGCCTTTACACCCCGTTGAATGGTGAGTCAAACAAAATTGGTTCTATCAACAATGATACGCTATTTGGAAGAGCTGGATTCTTTAGTACCATGTCATTTTGGTGGATGAATCCTTTGATGAAGAGGGGTAAAGAGAAAACACTTCTGGAAGAAGATATCCCAAAGTTGCGCGAGCAAGATCAAGCAGAAAGTTGTTACTTGCAGTTTCTAGACAACTTGAACAAGAAGAAACAGAATGATCCTTCTTCGCAATCATCGATTTTGTGGACTATAGTTTTATGTCACCGGAGAGAAATTCTGATATCAGGATTCTTTGCATTGCTTAAGGTGCTAGCTATTTCTGTTGGTCCACTGCTTCTGAATAACTTCATATTGGTTGCTGAGGGCAATGGAAGCTTCAAATATGAAGGGTTTGTATTGGCCATAACACTTTTCTTTACAAAGGTCATAGAATCTTTATCACAAAGGCAGTGGTACTTCCGAACCAGAACGATAGGTGTGAAAGTTAGATCTCTTCTCACCGCAGCCATTTATAAAAAACAACTGAGATTATCAAATTCTGCTAGATTGAATCATTCTGGTGGTGAGATCATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTTCCTTATTGGTTTCACCAGACATGGACGACTAGTGTCCAGCTATGTATCTCCTTGGTAATACTTTTTCAAGCCGTCGGGCTAGCTACGATTGCTTCTTTGGTGGTGATAATTATCACTGTGCTTTGCAATACTCCACTTGCGAAGTTGCAGCATAAGTTCCAAAGCAAACTTATGGTGGCACAAGACGAGAGATTGAAGGCTACTTCTGAGGCTCTTGTGAATATGAAGGTGCTGAAATTGTATGCCTGGGAAACCAACTTCAAGGATTCCATTGAAAGATTGAGGAATGTGGAGCTGAAATGGTTGTCTGCAGTGCAATTGCGCAGGGCCTACAACTCCTTTCTCTTCTGGTCCTCGCCGGTGTTGGTATCCGCTGCTTCATTTGGGGCTTGTTACTTTCTTAACGTTCCCCTGCATGCTAACAATGTTTTCACCTTTGTGGCAACTTTGCGCCTCGTTCAAGATCCAATTAGAACCATTCCTGATGTCATTGGGGTGGTCATTCAGGCCAAAGTTGCGTTTGCCCGGCTTGTAAAGTTCCTTGAGGCACCTGAACTGCAGAATGCAAATGTCAAGAAGAAGAGTTTCAGTGAGAATATGAGGGGCTCAATTTCAATCAAGTCTGCTGACTTCTCATGGGAAGATAATGCATCAAAACCGACACTGAGAAATATAAACTTAGAGATTGAAGTTTATGGCAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTACAATAAGGGAAAACATATTGTTTGGATCAGCAATGGATACTCAAAAATATAGAGAAACGCTGCAAAGGTCTTCACTAATAAAGGACCTTGAGTTGTTTTCCCACGGTGATCTCACTGAAATAGGGGAGAGAGGGGTTAACCTTAGTGGAGGCCAAAAGCAACGGATTCAACTCGCTCGTGCTCTTTACCAAAATGCTGATATTTATCTCTTGGATGATCCATTCAGTGCAGTTGATGCACATACTGCCACAAATCTGTTTAAGGAATACATCATGGAAGGACTTGCAGGGAAGACAGTTTTGCTTGTCACTCATCAAGTTGACTTTCTTCCTGCATTTAATTCTGTCTTGTTGATGTCAGATGGTGAAATCCTACAAGCTGCTCCTTATCATGATTTGTTAGCTTCAAGTCAAGAATTTCAGGACCTTGTGAGTGCTCACAAAGAGACTGCTGGTTCTGACCGGCTTATGGATGTTACTTCTTCGCAGCGAAATTCTAATCCCGCTGTAGAGATTAAGAAAACAACTTATGTGGAGAAGCAGTTTGATGCATCACAAGGAGATCAGCTAATCAAGGAAGAAGAGAGAGAGAAAGGAAACCAAGGCTTCCGGCCTTACTTGCAGTATCTGAATCAGAACAAAGGATATATGTACTTCTCTGTGGCTGTCATTTCTCAGATTACGTTTGTGGTTGGCCAGGTTTTGCAAAACTCATGGATGGCTGCCAATGTTGACAATTCTGATGTCAGCACTTTGAAATTGATCGTAGTGTACCTCTTGATCGGATTTATTTCAACATTTTTCTTGTTGACGAGAAGTCTAATTACAGTGGCTATGGGACTTCAGTCATCAAAATCATTATTTCTACAGCTACTGAATTCTCTCTGTCGCGCTCCGATGGCGTTTTATGACTCCACCCCCTTGGGACGGATACTTAGTAGGGTTTCTGCAGATCTCAGCATTGTTGATCTTGATGTCCCATTTGGCCTTCTTTTTGCTGTGGCAGCTACTTCTAACTGTTATGCTAATCTTACAGTCTTAGCAGTTGTTACTTGGCAAGTCTTGTTTGTCTCTATACCAATGATTATTTTTGCAATAAGATTGCAGAGATATTACTTTGCTACTGCAAAAGAATTGATGCGGCTCAATGGCACAACAAAATCCTATGTAGCTAATCATCTTGCTGAATCTGTAGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTCGCGGAGAATCTTCATTTGATTGATGTCAATGCTAGTCCTTTTTTCCATACTTTTGCAGCAAATGAGTGGTTGATTCAGCGGTTGGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCTGCACTTTGCATGGTTATACTTCCCCCTGGGACTTTCACATCTGGATTTATTGGCATGGCTCTCTCATATGGCCTTACTCTTAATGCTTCACTAGTATTTTCAATTCAAAATCAATGCAACATCGAAAATTACATAATATCGGTGGAGAGACTTAATCAATATATGCATGTACCAAGTGAGGCTCCAGAAATTATAGAAGGGAATCGTCCTCCAACAAATTGGCCACTTGAGGGAAAAGTAGAAATACGTGATTTGCAGATTCGATATAGACCTGATGCGCCTCTTGTTCTCCGAGGAATCACTTGCACATTTGAAGGAGGACACAAGATTGGTATTGATCCTACTCTCTTCAATGGAACAGTCAGATACAATATGGACCCCTTAGGGCAACACACTGATCAAGAGATTTGGGAGGTTCTTGCCAAGTGTCAGTTGCGAGAGGCTGTCCAAGAGAAAGAAGAGGGATTAGATTCCTCAGTGGTTGAAGCCGGGGCGAACTGGAGTATGGGGCAACGGCAATTGTTTTGTCTGGGGCGTGCACTTTTAAGGAGAAGTCAGATATTAGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACTGATTTGATTCTGCAGAAAACCATCAGGACTGAGTTTGCAGATTGTACTGTAATCACAGTAGCTCACAGGATACCAACTGTCATGGATTGCACTAAGGTTCTTGCCATCAGTGATGGAAAACTGGTAGAGTATGATGAGCCAATGAACTTGATGAAGAGGGAAGGATCACTTTTTGGGCAGCTTGTTAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCACACTGA 4185 0.4162 MEGFWSLFCGEETGCSEATGKPCSYDFKFLIDPSSCINHFLISCFDVLLLLMLLFIMINKSPSKPLHGLTRSRRHSKLHLVSAIASGALGLVHLCLGIWVLVENLSKTHTSLPLDLWLLEFFQGLTWLSVSIAIILGLKQLPRPWLRTFSVLIFLVSSISCAFSLFYVIGSKDLSLKVVLDILSLPGATLLLLCTYKCRETDMELDESLYTPLNGESNKIGSINNDTLFGRAGFFSTMSFWWMNPLMKRGKEKTLLEEDIPKLREQDQAESCYLQFLDNLNKKKQNDPSSQSSILWTIVLCHRREILISGFFALLKVLAISVGPLLLNNFILVAEGNGSFKYEGFVLAITLFFTKVIESLSQRQWYFRTRTIGVKVRSLLTAAIYKKQLRLSNSARLNHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCISLVILFQAVGLATIASLVVIIITVLCNTPLAKLQHKFQSKLMVAQDERLKATSEALVNMKVLKLYAWETNFKDSIERLRNVELKWLSAVQLRRAYNSFLFWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARLVKFLEAPELQNANVKKKSFSENMRGSISIKSADFSWEDNASKPTLRNINLEIEVYGKFAYVSQTAWIQTGTIRENILFGSAMDTQKYRETLQRSSLIKDLELFSHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKEYIMEGLAGKTVLLVTHQVDFLPAFNSVLLMSDGEILQAAPYHDLLASSQEFQDLVSAHKETAGSDRLMDVTSSQRNSNPAVEIKKTTYVEKQFDASQGDQLIKEEEREKGNQGFRPYLQYLNQNKGYMYFSVAVISQITFVVGQVLQNSWMAANVDNSDVSTLKLIVVYLLIGFISTFFLLTRSLITVAMGLQSSKSLFLQLLNSLCRAPMAFYDSTPLGRILSRVSADLSIVDLDVPFGLLFAVAATSNCYANLTVLAVVTWQVLFVSIPMIIFAIRLQRYYFATAKELMRLNGTTKSYVANHLAESVAGAVTIRAFEEEDRFFAENLHLIDVNASPFFHTFAANEWLIQRLETVSAVVLASAALCMVILPPGTFTSGFIGMALSYGLTLNASLVFSIQNQCNIENYIISVERLNQYMHVPSEAPEIIEGNRPPTNWPLEGKVEIRDLQIRYRPDAPLVLRGITCTFEGGHKIGIDPTLFNGTVRYNMDPLGQHTDQEIWEVLAKCQLREAVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSQILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGQLVKEYWSHFQSAESH 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90684g00006 1394 FunFam Multidrug resistance-associated protein member 4 1231 1384 - -
Stsc90684g00006 1394 SUPERFAMILY ABC transporter transmembrane region 882 1178 IPR036640 GO:0005524|GO:0016020
Stsc90684g00006 1394 Pfam ABC transporter 649 740 IPR003439 GO:0005524
Stsc90684g00006 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 810 IPR027417 -
Stsc90684g00006 1394 CDD ABCC_MRP_domain2 1196 1366 - -
Stsc90684g00006 1394 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00006 1394 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 884 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00006 1394 Gene3D ABC transporter type 1, transmembrane domain 278 604 IPR036640 GO:0005524|GO:0016020
Stsc90684g00006 1394 Gene3D ABC transporter type 1, transmembrane domain 846 1179 IPR036640 GO:0005524|GO:0016020
Stsc90684g00006 1394 SUPERFAMILY ABC transporter transmembrane region 295 600 IPR036640 GO:0005524|GO:0016020
Stsc90684g00006 1394 Gene3D - 1231 1383 IPR027417 -
Stsc90684g00006 1394 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Stsc90684g00006 1394 CDD ABC_6TM_ABCC_D2 880 1173 IPR044726 GO:0140359
Stsc90684g00006 1394 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 231 1230 - -
Stsc90684g00006 1394 Pfam ABC transporter 1195 1313 IPR003439 GO:0005524
Stsc90684g00006 1394 FunFam ABC transporter C family member 5 847 1179 - -
Stsc90684g00006 1394 Gene3D - 646 832 IPR027417 -
Stsc90684g00006 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1188 1375 IPR027417 -
Stsc90684g00006 1394 Pfam ABC transporter transmembrane region 306 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00006 1394 Pfam ABC transporter transmembrane region 882 1141 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Stsc90684g00006 1394 FunFam ABC transporter C family member 10 290 603 - -
Stsc90684g00006 1394 CDD ABCC_MRP_domain1 622 788 - -
Stsc90684g00006 1394 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1083 1382 IPR003439 GO:0005524
Stsc90684g00006 1394 ProSitePatterns ABC transporters family signature. 713 727 IPR017871 GO:0005524|GO:0016887
Stsc90684g00006 1394 FunFam Multidrug resistance-associated protein 4 610 828 - -
Stsc90684g00006 1394 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 586 811 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90684g00006 Stsc-Chr90684 36966 42509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90684g00006 652 831 Calmodulin-binding Proteins AT2G36910 31.771 2.52e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90684g00006 K05666 - gmx:100811468 2235.68