Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90683g00007 ATGGGAAGGAGGATATTAAATGATGCGTTGAGGAGTATGGTGAATGCAGATAGGAGAGGGAAAGCTTCCGTGGAGCTCAAGCCTATCTCCACTGTCATCTCCTCCTTTCTCCAAATCATGAAAAGTCGAGGCTACATCAAGAACTTCCAAGTTTATGATCCGCATAGAGTGGGCAGGATAACAGTTGAACTGCAAGGTAGGCTTAACGATGCCAAGGCACTTACATATCGACAAGACATCAAGGCAAAGGATATTGAGGCCTACAGATTTCGTACTCTCCCAACACATCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATGAGAAGGAATGTAGGTGGACAGGTTCTTGGTTATTTTCACTAG 390 0.4462 MGRRILNDALRSMVNADRRGKASVELKPISTVISSFLQIMKSRGYIKNFQVYDPHRVGRITVELQGRLNDAKALTYRQDIKAKDIEAYRFRTLPTHQWGYVVITTPDGVLDHEEAMRRNVGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90683g00007 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Stsc90683g00007 129 Gene3D - 69 129 - -
Stsc90683g00007 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 128 IPR000630 GO:0003735|GO:0005840|GO:0006412
Stsc90683g00007 129 Gene3D - 2 68 - -
Stsc90683g00007 129 FunFam 40S ribosomal protein S15a 1 68 - -
Stsc90683g00007 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90683g00007 Stsc-Chr90683 54654 57077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90683g00007 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 82.946 3.81e-81 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90683g00007 K02957 - qsa:O6P43_003925 236.498