Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90682g00033 ATGAAGTTAAGATGGCATGTCCAGTGTGTAGAGGTGCTTGCACTTGTAAAGATTGCTTGGCTATTCAATGTAAAGACAGAGAAAGAGTATTTAGCTGGTAGAAGCAGAGTTGATAGAATATTGCATTTTCATTATTCAATCTGTATGCTGCTTCCTGTACTGAAACAAATAAGTGAAGATCAGCATATTGAGCTGGAAACGGAAGCGAAAATCAAAGGGAAGACAGTCACTGATATTCTAGTCAAGCAGGTCGAATTCGGCCGCAATGAGAAGAATTACTGCAATCACTGCAAAACATCCATCCTGGATCTTCATAGGAGCTGCCTTAGTTGTTCCTATAGCCTTTGCTTAAGTTGTTGTCAGGAATTAAGACAAGGAAGAGCCTCGGAAGAAGTTAGCTCTTCTTTCTCCAAGCTACCTGACGAAATGAGCAGTTGTACTGCTGGTGAAAACCAACTTTTGGATGATGAGGCCATTTTACGCGAAAACTCAACTGGCTATTCGATGTTGCCCGAATCGTTTGGGTTTGATGGTACATATGATGTATCATGTCCACCTACGGAGTTAGGTGGTTGTGGCGATAGCCATCTTGATTTGAGATGTGTCTTCCCCTTAAGCTGGATTAAAGAGATGGAAGTAAAGGCAGATGAAATAGTTTGCAGCTATGAATTTCCAGAAATTTTGGATAAAAGTTCATCCTGCTCACTGTGTATGGACAGAGATCAAAAGCTACAAAAAGCAGCTCAAAGAGAAGATTCTAATGATAATTGCTTGTTTTATCCTACGGTTTTGGACGTTACCAGTGATCATTTTGAACACTTTCAGAAACACTGGGGGAAGGGCCATCCTGTAATAGTGCAAGATGCACTTAAGAGTACTTCAAACCTCAGTTGGGATCCGCTGGTCTTGTTCTGTGCTTATCTTGAGAGGAGCATTACAAGATATGAGAACAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATCAATATTAGGCAGTACTTTACTGGGTCTCTCAAAAGTCAGCCACAGAGAAACGATTGGCATGAGATGTTGAAAATAAAAGGCTGCTTGTCGTCCCAGCTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGCAATAATTGATGCTATACCAATTCAAGAGTACATGAATCCCATGTCTGGTTTCCTGAACTTAGCTGTAAATTTGCCACAGGGGACTACAAAACATGACATGGGACCATATGTCTATATCTCATATGGCTGTGCTGATGAAGAAACTGATTCTGTGACCAAACTCTGTTACGATTCATATGATTTGGTTAACATTATGGCACATACCACAGATGTCCCTCTGTCTGCAGAGCACCTTATTAAAATACGCAGATTATTGAAAAAGCACAAAGCTCTATGTCAAAGGGAGTCTTACAAAGTTACTGCTGAGCACGCTGAAGACACAGAACAAAATGAAGACCAAGGTGTGGTAAGAGAAGGAATGGACTTTTTCAGGAGAGTCAATAGAATATCTTCTATCCCCGCTGAAGCCAGAACGAAAACTAATCAGAGTTTAGACACCGAAATGTCCAGAAGTGGAGAATGTGATATAGTTCCTGATGCTGGAAAAGAACGAAGCTCTTCACCTATCGACAGGACAATTAAAAGCACTGAAATGTCTCCAGACCATGATAATCCTAGAAGTACCTTTGAAAATCTGAACGGTGATAAAAGCAAGTTTACTGAGGATTCTGGTGCTCAGTGGGATGTCTTTCGGAGAGAAGATGTACCAAAGCTCTTGGAATACCTCAAAAGGCATCATAATGAATTTTCTTGTAGCCATGAATACCAAGAGGAGATGGTTCATCCAATTCTTGATCAGAGCTTCTATCTCAACAATTCTCACAAAATGAGACTTAAGGAGGAGTTTGAAATTGAACCATGGACTTTTGAGCAACATGTTGGAGAAGCTGTTATCATTCCTACTGGATGTCCATACCAAATTCGGAATCCTAAGTGTTCTGTTCATGTGGTATTGGAATTCATTTCCCCGGAGAATGTTTCTGAAAGCATCCAATTGATTGATGAGGTTCGTCTGCTTCCAAAAGACCATATAGCAAAAGTAGACAAACTTGAGGTGAAGAAGATGGCCCTCTATAGCATGAATACAGCAATCAAAGAAATATGTGACTTTACAAGCAAAACTTGA 2196 0.403 MKLRWHVQCVEVLALVKIAWLFNVKTEKEYLAGRSRVDRILHFHYSICMLLPVLKQISEDQHIELETEAKIKGKTVTDILVKQVEFGRNEKNYCNHCKTSILDLHRSCLSCSYSLCLSCCQELRQGRASEEVSSSFSKLPDEMSSCTAGENQLLDDEAILRENSTGYSMLPESFGFDGTYDVSCPPTELGGCGDSHLDLRCVFPLSWIKEMEVKADEIVCSYEFPEILDKSSSCSLCMDRDQKLQKAAQREDSNDNCLFYPTVLDVTSDHFEHFQKHWGKGHPVIVQDALKSTSNLSWDPLVLFCAYLERSITRYENNKDLLEACLDWCEVEINIRQYFTGSLKSQPQRNDWHEMLKIKGCLSSQLFKEQFPAHFAAIIDAIPIQEYMNPMSGFLNLAVNLPQGTTKHDMGPYVYISYGCADEETDSVTKLCYDSYDLVNIMAHTTDVPLSAEHLIKIRRLLKKHKALCQRESYKVTAEHAEDTEQNEDQGVVREGMDFFRRVNRISSIPAEARTKTNQSLDTEMSRSGECDIVPDAGKERSSSPIDRTIKSTEMSPDHDNPRSTFENLNGDKSKFTEDSGAQWDVFRREDVPKLLEYLKRHHNEFSCSHEYQEEMVHPILDQSFYLNNSHKMRLKEEFEIEPWTFEQHVGEAVIIPTGCPYQIRNPKCSVHVVLEFISPENVSESIQLIDEVRLLPKDHIAKVDKLEVKKMALYSMNTAIKEICDFTSKT 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90682g00033 731 MobiDBLite consensus disorder prediction 515 574 - -
Stsc90682g00033 731 MobiDBLite consensus disorder prediction 533 561 - -
Stsc90682g00033 731 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 35 727 IPR045109 GO:0032454|GO:0033169
Stsc90682g00033 731 SMART cupin_9 371 694 IPR003347 -
Stsc90682g00033 731 SUPERFAMILY Clavaminate synthase-like 270 714 - -
Stsc90682g00033 731 Pfam JmjC domain, hydroxylase 581 673 IPR003347 -
Stsc90682g00033 731 Gene3D Cupin 262 703 - -
Stsc90682g00033 731 ProSiteProfiles JmjC domain profile. 390 694 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90682g00033 Stsc-Chr90682 136967 142414 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Stsc90682g00033 JmjC 2.2e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90682g00033 K15601 - gmx:100802129 1026.54