Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90682g00022 ATGGGCCACGATGAAGAACTCAAACACTGCCAGAATAACTCGCCGGAATCCTCCAATCTCCGGCGAGTCCTCAACCTCATTTCCTCCTTAATCTCCCTCTCCCTCTCCATCAGGGTCTTCGCCGGAAAATGGCAACTGATTCGCAACAAGCTCGAGGAGCTCTACTCTGCTCTAGTCGGCGCCGACGACGACCCTTCCCTCTCCTGCGTTCTCCCTGCGATCCTCTCCACCGCCGAGGAGTGCTCCGACCTGGCTCGCCGCTGCACCGATCTGACATACAGCGGGAAGCTCCTTATGCAGAGCGACCTAGAAGTGGTTTTCGCGAAGCTCCATTGCCACGTGAAGAAGCTCTCTGAGATGTACACCAAGGGCGTTCTCACACACAGCTACGCTCTCGTCGTTTCAAAGCCTGCACTCGGAGCTTCCAAAGAGGACATGAGGTTCTTCGTCAGGGACCTCCTCACCAGAATGAAGGTCGGCGATGTTGGTATGAAGAAGCAAGCATTGATCAACCTTCACGAAGTTGCTTCCGAAGATGACAAGTATGTCAAGGTGATTGTTGAAGTCGGTGAAGTTGTTCATGTTCTGGTTGATTTTCTGGGCTCCTCTGAGTTGGAGATTCAACAAGAGTCTGCAAAGATTGTTTCTTTGATTGCGGGGTTTGATTCTTATAAAGGGGTTCTTGTTGGTGCTGGTGTTGTTGCTCCTTTGGTTAAGCTTCTGGAGTGTTCAAGTAGTGAGACTGGTAAAGTTGCTGCTGCTTTGTGTCTGCAGAGTTTGACTGAGAACTCTGATAATGCTTGGTCGGTTTCCGCTCACGGCGGCGTCACGGCGTTGTTGAAGATTTGTGCCGGTGTGGAGTCCAGAGGGGAATTGGTTTGTCCTGCTTGTGGAGTTTTGAGGAATCTTGTTGGGGTTGAAGAGATTAAAAGGTTTATGGTTGATGAAGGTGTGGTTTCAATCTTCATTAGGCTTATGAGGTCAAGGGATGAAGCGATTCAGGTGAGTTCTATTGAGTTTCTTCAGAGTATTGCATCTGGAGATGAATCTTTGGTTAAGCAGATTGTTGTTAGAGATGGCGGTGTTCGTGTTCTGTTGCGAGTTTTGGATCCTAAATGGCCTTGTTCTTCAAAAACAAGAGAGGTAGTTATGAGGGCTATTGAGAATTTGTTCTTCTCTTGGTCTAGTTGTGTCACTCTTTTGATGAGTTATGGTTTTGTGGATCAATTGATGTACTACATTCGAAATGGCGAAGTTTCTGTTCAAGAATTGGCTCTCAAGGTTTCGTTTAGATTGTGTGGGACATCTGAAGATGCTAAGAAAGCTCTAGGTGATGCTGGATTCATGGCAGAGCTTGTCAAGTTTCTAAGTGCGAAATCGTTCGAGGTTCGAGAAATGGCGGCTGAGGGGCTCTCTGAGATGGTTAATGTTCCTAAGAACAGGAAGAGGTTTGTGCAAGATGATCAAAACATTGGTCTTCTTCTGCAGTTGTTGGATCCAGAAGAGGGGAATTCAGGTAACAAGAGGTTCTTAATCTCTGTGTTGATGTCATTGACTAGTTGCAACAGTGGGAGGAAGAAGATTGTGAGTTCTGAGTATGCAAAGAACATAGAGAGGCTTGCAGCAGAATCTCAAGTTTCTTCTGCTGATGCAAAGAGACTTGTCAGGAAGCTATCCACCAATAGATTCCGAAACATGCTCAGTGGAATCTGGCACCACCACCACCACCACCACCATCATCACTCCCACTCTTGA 1755 0.4718 MGHDEELKHCQNNSPESSNLRRVLNLISSLISLSLSIRVFAGKWQLIRNKLEELYSALVGADDDPSLSCVLPAILSTAEECSDLARRCTDLTYSGKLLMQSDLEVVFAKLHCHVKKLSEMYTKGVLTHSYALVVSKPALGASKEDMRFFVRDLLTRMKVGDVGMKKQALINLHEVASEDDKYVKVIVEVGEVVHVLVDFLGSSELEIQQESAKIVSLIAGFDSYKGVLVGAGVVAPLVKLLECSSSETGKVAAALCLQSLTENSDNAWSVSAHGGVTALLKICAGVESRGELVCPACGVLRNLVGVEEIKRFMVDEGVVSIFIRLMRSRDEAIQVSSIEFLQSIASGDESLVKQIVVRDGGVRVLLRVLDPKWPCSSKTREVVMRAIENLFFSWSSCVTLLMSYGFVDQLMYYIRNGEVSVQELALKVSFRLCGTSEDAKKALGDAGFMAELVKFLSAKSFEVREMAAEGLSEMVNVPKNRKRFVQDDQNIGLLLQLLDPEEGNSGNKRFLISVLMSLTSCNSGRKKIVSSEYAKNIERLAAESQVSSADAKRLVRKLSTNRFRNMLSGIWHHHHHHHHHHSHS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90682g00022 584 SUPERFAMILY ARM repeat 152 544 IPR016024 -
Stsc90682g00022 584 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 573 - -
Stsc90682g00022 584 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 274 318 IPR000225 GO:0005515
Stsc90682g00022 584 Gene3D - 149 580 IPR011989 -
Stsc90682g00022 584 SMART arm_5 221 262 IPR000225 GO:0005515
Stsc90682g00022 584 SMART arm_5 348 392 IPR000225 GO:0005515
Stsc90682g00022 584 SMART arm_5 436 476 IPR000225 GO:0005515
Stsc90682g00022 584 SMART arm_5 179 220 IPR000225 GO:0005515
Stsc90682g00022 584 SMART arm_5 263 305 IPR000225 GO:0005515
Stsc90682g00022 584 SMART arm_5 306 346 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90682g00022 Stsc-Chr90682 97573 99717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90682g00022 150 425 U-box Gene Family AT2G23140 24.643 7.08e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90682g00022 - - gmx:100783537 776.933