Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90682g00016 ATGCAAACGAGGTACTTAGATAGATCAATGGAGAAGCGAAGTTTGGATTCAACCTCCGCTGATGAAGACCAACCTCAAAAGAAGAGACCTGCTTTGGCCAGTGTAATTGTTGAAGCCCTGAAGGTGGACTGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATCCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAACTAGGAACCGCCAAGCTTAGTGGGAGGACTTCTCCTAAGAAAATAGAAGGCCATGATGGTAGCAATTTACAGTTACACTTCAAGACCAGGCTATCTCTTCCTCTCTTTACCGGTGGGAAAGTGGAGGGAGAGCAAGGCACAGCCATACATATTGTTCTGGTTGATGCAAGCACAGGCCATATTGTCACATCTGGTCCAGAATCATGTGTAAAATTAGATGTTATTGTGCTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGTCGTGTCGTGAAAGAGCGAGAAGGAAAGAGACCTCTTTTGACAGGTGATCTGCAAGTGATACTGAAGGATGGTGTAGGTACCTTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGAAGTAGGAAGTTCAGGTTGGGTCTCAAAGTTGCCTCAGATTGTAATGTGGGCAAGCGAATTCGAGAAGCCAAAACTGAAGCTTTCACTGTTAAAGATCACCGTGGGGAATTATACAAGAAACACTATCCACCTGTCCTGAATGATGAGGTATGGAGACTGGAGAAGATCGGCAAGGATGGTTCCTTTCACAAAAGGCTACATAGAGCAGGGATATTTACTGTTGAAGATGTCCTAAAACTTGTGGTCAGAGACCCACAGAGGTTGCGAAATATCCTTGGGAGCGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAACATGCAAAGACTTGTGTTCTCAGCGGAAAAGTTTATGTGTATTATCCTGATGATGCAAGGAGTGTTGGTGTTGTTTTTAATAACATCTATGAGTTGAGTGGCTTAATAGCCAATGACCAGTACTACTCTGCTGATTCTCTCTCTGATAGTCAAAAAGTATATGTGGACACATTGGTGAAGAAGGCATATGAAAATTGGATGTGTGTAATTGAGTATGATGGCAAGTCTCTGCTATATTACAATCAGAACAAGACATTGGACACTGCTCAACCTCAACTTCTAATGGATTCCCATAATTATTCAAATTCAAACCCACTTGATCAGCAGACCTCCATCCCAAATTTACCTGTTCCTGTACCCACATGCACATGGCAACCTTCAATGGATCCAGGAGTAACAGTTGCAGGTTATCATGATAGTGCAGCTACTAGATTCTCAATCCAACTGCAGAATGCTAATCTTAATTCTTCAATGCAGGCACAACACAATGTGATGACTCTTGGTCCTACTCCTACACAATCAGGCACTCCTGGCTTACAGACAATTGGCATTTCTAATCCTAGTTATAGAGGGTTTGAAGATTACTTCCCAGAGGAGGAGATTCGAAGCAGAAGTCACGAAATGCTAGAGAATGAAGATATGCAGCGTCTGCTCCGCATTTTTAATGCCGAAGATGGATACCCCTATTTATCTAGCTACATGCCTGCAGACACCATGAGCTACAACTTTGACAATGAGAAGAATCGTTCGTCGGGAAAGGCTGTCGTGGGCTGGCTAAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTCGGAAGAAGGCAGCTGAGAGGCGGGCTCAGCTTGTTGAGATGGATGGCCCCTAG 1806 0.4341 MQTRYLDRSMEKRSLDSTSADEDQPQKKRPALASVIVEALKVDCLQKLCSSLEPILRRVVSEEVERALAKLGTAKLSGRTSPKKIEGHDGSNLQLHFKTRLSLPLFTGGKVEGEQGTAIHIVLVDASTGHIVTSGPESCVKLDVIVLEGDFNNEDDDNWSEEEFESRVVKEREGKRPLLTGDLQVILKDGVGTLGELTFTDNSSWIRSRKFRLGLKVASDCNVGKRIREAKTEAFTVKDHRGELYKKHYPPVLNDEVWRLEKIGKDGSFHKRLHRAGIFTVEDVLKLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKVYVYYPDDARSVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKKAYENWMCVIEYDGKSLLYYNQNKTLDTAQPQLLMDSHNYSNSNPLDQQTSIPNLPVPVPTCTWQPSMDPGVTVAGYHDSAATRFSIQLQNANLNSSMQAQHNVMTLGPTPTQSGTPGLQTIGISNPSYRGFEDYFPEEEIRSRSHEMLENEDMQRLLRIFNAEDGYPYLSSYMPADTMSYNFDNEKNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVEMDGP 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90682g00016 601 PANTHER OS02G0177800 PROTEIN 11 527 IPR012416 GO:0005516
Stsc90682g00016 601 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Stsc90682g00016 601 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Stsc90682g00016 601 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Stsc90682g00016 601 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90682g00016 Stsc-Chr90682 68782 72072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90682g00016 12 596 Calmodulin-binding Proteins AT5G57580 59.409 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90682g00016 - - gmx:100802994 935.636