Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90681g00019 ATGCAACTCTTCCGTTTCTTCTTCTTGGAAGCGCTCTCTTCCTTCACCTTCTCCTCTAACGTTAAACGATCTAAGATAGTCCATGTCATCAAAGAGAGCTGCATAATCCCCGAAGCTTCTCTTTCTGTCGCAAGTATGGTGAGGGTTAGTGTTTTGAACGATGCTCTGAAGAGCATGTACAATGCTGAGAAAAGGGGGAAGCGTCAAGTGATGATTAGGCCATCCTCCAAAGTTATTATCAAGTTCCTTATTGTCATGTAG 261 0.433 MQLFRFFFLEALSSFTFSSNVKRSKIVHVIKESCIIPEASLSVASMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVM 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90681g00019 86 SUPERFAMILY Ribosomal protein S8 49 86 IPR035987 GO:0003735|GO:0005840|GO:0006412
Stsc90681g00019 86 PANTHER 40S RIBOSOMAL PROTEIN S15A 46 86 IPR000630 GO:0003735|GO:0005840|GO:0006412
Stsc90681g00019 86 Gene3D - 46 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90681g00019 Stsc-Chr90681 136104 137029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90681g00019 46 86 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.561 1.56e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90681g00019 K02957 - msin:131218932 85.5001