Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90679g00011 ATGAAAAAGCTGAAGTCCTTAAATCTGTGGGATTGCCGTCGGCTGAAACAAGTTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTTAATCTTGGATGTTGCGCTGAACTGAATGATTTTCCTTCCTATCTCACACACCACAAGAGCCTTGTTAAACTTACATTATGGAAGTGCTCAAGGTTTGAAACCCTTGGAAGTAAATTGGAGATGAGTTCCCTCCAAGAGCTAGATCTTAAGGGCTGCACAAGAATGAGGAAGCTTCCAGAATTTGGAGAATCCATGAAACATTTATCAATTCTTTCTTTGTGGTCAACAGCCATAGAAGAACTGCCCACAACAATTGGCTGTTTAGTTGGCCTAAAGGAGTTGCACTTAGACCATTGCAAAAGGCTTGCTTGCCTTCCAGATAGCATTCAAGATTTAAAATCTCTCACACTTTTGAGTCTTTCTCACTGCCCAAATGCCCTTCAATCTTTGCATTCTCTGTCTGGTCTGACCTCATTAGGTACTCTCAGATTATCGGGATGTTTTCTCACCTCTCAAGAGTCATCATCGTCTTACGATCTTGGCAACTTAGTGTCTTTGACGGATTTGGAATTATCAAAAAACAATTTTGAAAGGGTTCCAATAAATATCCATGAATTGCCAAGGCTTAGATGTCTGAATTTAGACTACTGCCCTAATCTGAAGGTTTTACCAGAGCTTCCATCAAGTATAAGAGAATTATCTGCACAAGATTGTGGATCATTGGATATACGATGGAATTCTAATGTTCTATCAAAGGTGTGTTGTAGCTTTGCAGAATCAGCTAACCATGATGCTGAAGGGCTCTTGCAAATGTTTGTCACACAGAAGCAAACAAGATTGAAAATAGAGGAGGAAATTCCAACTTGGTTCGTGCATCAAGAACAAGGTAATGGAGTATCAGTAACTTTGCCACACAATAAAACCATGGCACTTGCTCTTTGCTTCCAATTATGCCCAGTGACAAGTAGTCATATTTCTTGTGGACCACTTCCTGCGTGTCCGTCGGTGATTTGCAATGGTAAAGATTTCATCAAAGAGAGTTTAACTGAGATGTTTGAAACTAATCATTCTCAGCATTTCATCCTCTGCTTGCCAAGTGACTATTTTGTTGACCAAGTTTGCCAAGACTATAACTTCCAACTGCTATTTCCTATTTACTTTCAAATGAAAGTAGTGAGCTCTAGGGCTCGTTGGGTGTGCAAGCAAGACATTCAAGATCTGAAGAAAAGTGGAAGCCAAACATGA 1275 0.4 MKKLKSLNLWDCRRLKQVPDLSEAPNLEILNLGCCAELNDFPSYLTHHKSLVKLTLWKCSRFETLGSKLEMSSLQELDLKGCTRMRKLPEFGESMKHLSILSLWSTAIEELPTTIGCLVGLKELHLDHCKRLACLPDSIQDLKSLTLLSLSHCPNALQSLHSLSGLTSLGTLRLSGCFLTSQESSSSYDLGNLVSLTDLELSKNNFERVPINIHELPRLRCLNLDYCPNLKVLPELPSSIRELSAQDCGSLDIRWNSNVLSKVCCSFAESANHDAEGLLQMFVTQKQTRLKIEEEIPTWFVHQEQGNGVSVTLPHNKTMALALCFQLCPVTSSHISCGPLPACPSVICNGKDFIKESLTEMFETNHSQHFILCLPSDYFVDQVCQDYNFQLLFPIYFQMKVVSSRARWVCKQDIQDLKKSGSQT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90679g00011 424 Gene3D Ribonuclease Inhibitor 89 273 IPR032675 -
Stsc90679g00011 424 Pfam C-JID domain 293 386 IPR045344 -
Stsc90679g00011 424 SUPERFAMILY L domain-like 1 244 - -
Stsc90679g00011 424 Gene3D Ribonuclease Inhibitor 1 88 IPR032675 -
Stsc90679g00011 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90679g00011 Stsc-Chr90679 55541 56815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90679g00011 1 153 WRKY Transcription Factor Family AT4G12020 36.601 2.31e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90679g00011 - - ahf:112769348 548.51