Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90679g00010 ATGTTGATCCCATACTTGCCATCTTCCATGAACAAGCTCGTAGGGATTGATTCAAGAGTGGAAAAAGTGATTAGTCACATTGGTATGGGGCTAAATGATGTTCGTTATATAGGTATATGTGGGATGGGAGGTATAGGTAAAACAACTGTTGCTAGAATAGTATATGAAGCAATCCAAAGTGAATTTGAAGTTACGTATTTTCTTGCCAATGTAAGAGAGATATGTGAGAAAAATGGTATTGTTCAAGCACAAAAAGAGCTTATTGGCCATATCAATGGGAGCTTGAGTAATTTTAATAATGAGTATGATGGGAGTAGAATAATTCAAGCTTCTTTGTGTCACAAAAAGGTTCTTCTTGTTCTCGATGATATAAATATAGACAAACAATTGAAGAATTTAGCCGAGATGAAAGATTGGTTTGGTTCTGGAAGCAGAATAATTATCACAACTAGAGACATGCAACTACTGAAGATACATGATGCACATGAAATTTACAAGATTGAAGAGTTAGCAGAAAGTGAAGCCTTTGATCTCTTTAGTTTGAAGGCTTTTAAACAACAAAAGCCTGCAGAGGAGTATTTGAAGTTGTCCAGACAGGTGGTCAAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTATTAGGTTCTTATCTCTACGGTAGGCCTATTGAAGATTGGAATAGTGCTCTTGAAAAATTAAAGAGCGTTCCACATCTGGACATTTATGATGCATCTCTACTCACTATAAATAAGAATGGTTCATTGGAGATGCATGACTTGCTTAAAGAAATGGGCAAATATATTGTAAATCAAGAATCTCCAAATGATCCTAGCAAGCGTAGCAGGTTGCGGAGTTACCAGGACATCAATTTTGCTCTCACTCAAAATAAGGGAACTGAAGCAACTCAGAGCATCGTTTTATACATTAAGGGGATATATCAAGAAAAATATAGAGTGCGTTGGAGAGATTTAACTTTTTCAAATATATGCCAACTAAAGCTCCTCATTTTAGATGGCGTGAAAGCTCCAATTCTTAGCTATATTCCTTGTTCATTGAGAGTGTTAAACTGGAGACGTTTGTCCAATGGAAACTCTGCCCTTTGTGGATCGTTACTATGA 1119 0.3664 MLIPYLPSSMNKLVGIDSRVEKVISHIGMGLNDVRYIGICGMGGIGKTTVARIVYEAIQSEFEVTYFLANVREICEKNGIVQAQKELIGHINGSLSNFNNEYDGSRIIQASLCHKKVLLVLDDINIDKQLKNLAEMKDWFGSGSRIIITTRDMQLLKIHDAHEIYKIEELAESEAFDLFSLKAFKQQKPAEEYLKLSRQVVKYCAGLPLALEVLGSYLYGRPIEDWNSALEKLKSVPHLDIYDASLLTINKNGSLEMHDLLKEMGKYIVNQESPNDPSKRSRLRSYQDINFALTQNKGTEATQSIVLYIKGIYQEKYRVRWRDLTFSNICQLKLLILDGVKAPILSYIPCSLRVLNWRRLSNGNSALCGSLL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90679g00010 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Stsc90679g00010 372 Pfam NB-ARC domain 18 235 IPR002182 GO:0043531
Stsc90679g00010 372 Gene3D - 169 249 IPR042197 -
Stsc90679g00010 372 Gene3D - 2 165 IPR027417 -
Stsc90679g00010 372 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 360 IPR044974 GO:0006952
Stsc90679g00010 372 PRINTS Disease resistance protein signature 204 218 - -
Stsc90679g00010 372 PRINTS Disease resistance protein signature 111 125 - -
Stsc90679g00010 372 PRINTS Disease resistance protein signature 36 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90679g00010 Stsc-Chr90679 53859 55383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90679g00010 14 357 WRKY Transcription Factor Family AT5G45050 26.005 1.35e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90679g00010 - - ahf:112769348 525.013