Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90679g00005 ATGCACCTGCTGAAGATATATGATGCACGTGAAATTTACAATGTTGAAGGGTTAGCAGAAAGTGAAGCCTTTGATCTATTTTGTTTGAAGGCTTTTAAACAACAAAACCCTGTAGAAGAGTATTTGGGTTTGTGCAAACAGGTGGTCAAATATTGTGCTGGTCTTCCATTAGCACTTGAGGTATTGGGTTCCCACCTTTATAAGAGACTTATTGAAGTTTGGCATAGCACTCTTGCAAAATTAAGGAGCTTTCAACATGTTGACATTTTTGATAGATTGAAAATAAGTTACGATAGTTTAGATACTGTGGACAAGAAAATTTTTTTAGATATCGCTTATTTTTTCAAAGGAAAGAGAAAAGAATATGTAATAGATATATTAGAAGCGTGTGGTTATCCTGCTGAAGATGGTATTGCTACTTTGGTTGATAGATCTCTACTTACTAAAAATGAGAATGGTTCATTGGAGATGCATGATCTGCTTGAAGAAATGGCCAAACATATTGTAATTCAAGAATCTCCAGATGATCCTAGCGAGCGTAGGAGGTTGCGGAGTTGTCAGGACATCAATCTTGTTCTTACTCAAAACAAGGGAACTGAAGCTACTCAAAGCATAGTTGTAGGCGATAGGGAAATCTATCAAGAACGAGAACAATATAGAGAGCGTTGGAGAGATTTAACTTTTTCAAATATATCTCAGCTAAAGCTCCTTATTTTAGACGGGGTGCAAGCTTCAATTCTTAGCTATATTCCTTGTTCATTGAGGGTATTGCGCTGGAGAGACTGTCCAATGAAAACTCTACCCTTTGACGATCAATATTATGAGCTTGTTGAAATTGATCTGAATAACAGCGACAAAATTGTACAAGTATGGCATGGGAAAAAGTCTCTGGAAAAGCTGAAGCACTTAAATCTGTATGGTTGCGTTCAACTGAAACAAATTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTTAACCTTGGATTGTGTGTTGAACTGAATGATTTTCCCTCGTATCTTACACGCCACAAGAGCCTTGTTAAGGTTAATTTAGGTCCTTGCTCAAGTCTGGAAACTCTTGGAAGTAAATTGGAGATGACTTCCCTGCAGGTACTAAATCTTGGTGGCTGCAAAAGTATGAAGAAACTTCCAGAATTTGGAGAATGCATGAAGCATTTATCGATTCTTTCTTTGTCGAGAACAGCCATAGAAGAACTACCCACAACAATTGGCTTTTTTGTTGGACTTAAGGAGTTGCATTTACGAGAATGCAAAAGACTTACCAGCCTTCCAGAAAGCATTCAAGAGTTAAAATCCTTCAGAGTTTTGGATCTTTCTGACTGTCCAAATCTCATTCAATCTTTGCATTCCTTGTCTGGTCTGACCTCATTGGATACTTTGAGATTGTCAGGGTGTTTTCCCACATCTCAAGAGTCATTGTCTTACAATCTTGGCAACTTAGTGTCTTTGACGGATTTGGAATTATCATTTAACAAATTTGTAAGGATTCCAATAAATATCCATCAACTCCCCAGGCTTACACGTCTGAGTCTAAACTTCTGCTGTAACCTGAAGGTTTTACCGGAGCTTCCATCAAGTATAAAAGAGTTATCTGCTCGAGATTGCAAATCACTGGATGCAAGGGATTCGAAAGTGATATCGAAAATGTGTTGTGGCTTTGCTGCATTAGCTAACCATGATCCTTATGGCCTCTTGCAAATGTGGGTTGCGCAGAAGGAAATTCCATCGTGGTTTGTCTGTCAAGAACAGGGTAATGGAGTATCAATCACTTTGCCACTGATTTGCAACGGTACAGAATTTTTCAGAAAGCAATTGGGTAAGATGCGTAAATCTAATGATTCTGAGCTTATCATCCTCTGCTTGACCAGTGACAGCTTTGTTGACCAAGATTGCCAACACTATCGCTTCCAACTGGTATTTTCCGACCCTCTAGTGAAAGTACAGAGATCTGGGGCTCGTTGGATGCGCAAGCAAGACATTCAAGATTTGAAGAAAAGCAGAACTGAAACATCATAA 2040 0.3873 MHLLKIYDAREIYNVEGLAESEAFDLFCLKAFKQQNPVEEYLGLCKQVVKYCAGLPLALEVLGSHLYKRLIEVWHSTLAKLRSFQHVDIFDRLKISYDSLDTVDKKIFLDIAYFFKGKRKEYVIDILEACGYPAEDGIATLVDRSLLTKNENGSLEMHDLLEEMAKHIVIQESPDDPSERRRLRSCQDINLVLTQNKGTEATQSIVVGDREIYQEREQYRERWRDLTFSNISQLKLLILDGVQASILSYIPCSLRVLRWRDCPMKTLPFDDQYYELVEIDLNNSDKIVQVWHGKKSLEKLKHLNLYGCVQLKQIPDLSEAPNLEILNLGLCVELNDFPSYLTRHKSLVKVNLGPCSSLETLGSKLEMTSLQVLNLGGCKSMKKLPEFGECMKHLSILSLSRTAIEELPTTIGFFVGLKELHLRECKRLTSLPESIQELKSFRVLDLSDCPNLIQSLHSLSGLTSLDTLRLSGCFPTSQESLSYNLGNLVSLTDLELSFNKFVRIPINIHQLPRLTRLSLNFCCNLKVLPELPSSIKELSARDCKSLDARDSKVISKMCCGFAALANHDPYGLLQMWVAQKEIPSWFVCQEQGNGVSITLPLICNGTEFFRKQLGKMRKSNDSELIILCLTSDSFVDQDCQHYRFQLVFSDPLVKVQRSGARWMRKQDIQDLKKSRTETS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90679g00005 679 Gene3D Ribonuclease Inhibitor 388 559 IPR032675 -
Stsc90679g00005 679 Gene3D Ribonuclease Inhibitor 211 387 IPR032675 -
Stsc90679g00005 679 PRINTS Disease resistance protein signature 52 66 - -
Stsc90679g00005 679 PRINTS Disease resistance protein signature 436 452 - -
Stsc90679g00005 679 Gene3D - 17 101 IPR042197 -
Stsc90679g00005 679 Pfam NB-ARC domain 10 100 IPR002182 GO:0043531
Stsc90679g00005 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 111 IPR027417 -
Stsc90679g00005 679 SUPERFAMILY L domain-like 157 542 - -
Stsc90679g00005 679 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 391 545 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90679g00005 Stsc-Chr90679 26639 29126 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90679g00005 39 452 WRKY Transcription Factor Family AT4G12020 33.179 2.18e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90679g00005 - - ahf:112769348 874.389