Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90679g00004 ATGAACAAACTTGTAGGGATTGATTCAAGAGTGGAACAAGTGATTAGACTCATTGGTTTTGGGCAGAATGATGTTCGATATATAGGCATATGTGGGATGGGTGGTATAGGTAAGACAACTATTGCTAGAATCATATATGAAGCCATCCAAACTCAATTTGAAGTTACTTATTTTCTTTCCCGTGTAAGAGAGACATGTGAGAAACATGATATTGTTCAAGCACAAAAAGAACTCGTTGGCCATATCAATGGAAGCTTGACTGGTTTCAGTAATGAATATGATGGGAGGAGAATAATTCGTACTTCTTTGTGTCATAAAAAGGTTCTTCTTGTTCTTGATAATATAAATAAAGAAAAGCAGTTGAAGAATTTGGCGGAAGAGAAAGACTGGTTTGGTTCTGGAAGCTGA 408 0.3627 MNKLVGIDSRVEQVIRLIGFGQNDVRYIGICGMGGIGKTTIARIIYEAIQTQFEVTYFLSRVRETCEKHDIVQAQKELVGHINGSLTGFSNEYDGRRIIRTSLCHKKVLLVLDNINKEKQLKNLAEEKDWFGSGS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90679g00004 135 PRINTS Disease resistance protein signature 102 116 - -
Stsc90679g00004 135 PRINTS Disease resistance protein signature 27 42 - -
Stsc90679g00004 135 Pfam NB-ARC domain 11 124 IPR002182 GO:0043531
Stsc90679g00004 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 124 IPR027417 -
Stsc90679g00004 135 Gene3D - 1 135 IPR027417 -
Stsc90679g00004 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 135 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90679g00004 Stsc-Chr90679 26210 26617 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90679g00004 4 135 WRKY Transcription Factor Family AT4G12020 30.986 8.39e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90679g00004 - - ahf:112769348 221.861