Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90678g00005 ATGTGTGATGAGTTCTCATCAATTGGAAAAGAGAGTTTGGTTCATAAGGTAGAACTTATTCAAGATCAGTTTGATAAGTTTGATAAGGATCTTCCTGAGAATGGTTCTAAGGATGAGAATGGTTCTAAAGGTGCTCGTCTTCCTGATGCTGTCACTGGACAACCTGTTATTGCAAACTTTGAGGAAGATAATATGGAAATTGACGAAAGCAAGACTGGAGAGTCATGGGTTGAAGGGCTTGCCGAGGGAGAATATTCTGATCTCAGCGTAGAGGAACGTTTAAATGCTCTTGTTGTATTGGTTGGTGTGGCTAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAGTTCGACTAAAGGATGATAATGTAAATAAATCAGATTTTCCATCAATCAATGGGAATAAAGTTGAACCACAATACACAAGTCCTGCTGTTGGGGGGAACCAAAGCCCATTGCTTGACATTAATGTTGACAACAACAATAATGTTAACGAGGCATCACCCAGCACTGCAGAAAATAAAAAAGCTACGGCTGCACAGAACTTTGCCATGGAAAAGCCCTTGTTTGGTCAAGATTTCTGCACTGGTCCAGATAACCCTCAGAGTCAGCTATCTGCTCCCTATTCGAAAAGGTCTCGTTCTCAGTTGAAATCATATATTTCTCACATGGCAGAAGAGATGTCCGTTTACCGATCTTTACCCCTTGGTCAAGATCGCCGACGTAATCGTTATTGGCAATTCGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATTCCGAAGAGGCCTTCGATGCTCTTTTTAATTCACTTGATTTGCGTGGGATAAGAGAATCTCATTTGCGCATAATGTTACAAAAGATTGGAAGTTCCTTCAAAGAAAATGTTAGGAAGAATGCACAATCTGCCAATATTGGAAGCAGAGGTGAAAATTCTATTAAAAATGAAGTTGATGAAACAGATTCCAGTCCTGATTGCCATGCCTTGTCTGACAGTCCTAGCAGTACCCTCTGTGGCTTGAACTCTGATGCGTCTGAAACTTCTTCGTCATTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGGTGCCTTGAGAAGGTATCAAGATTTCCAGAAATGGATGTGGAAAGAATGCTATAACTCATCCATATTATGTGCAATGAAATATGGGAAAATGAGGTGCAAACCTCAGGTGGACATCTGTGATATCTGCCTAAACCCTTATTTCTTCGAAGATTCCCATTGCAATTGTTGCCATCATACTTTCCCCTCAAATAATGGATTTAATTTTTCAAAACATATATTTCAATGTGGGGGCAAGTTATCCAAAGATATTTGTATTCTGGATTCTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGCCTTGCTGGCTTTTATTGAGGCATCTGTTCCATCTGAAGCATTTCAATCAACTTGGACAGAAGATACTAGAAGGCACTGGGGTGTGAAGCTAAGCAAATCATCTTCTGTGGAGGAACTTCTTCAGTTATTGACTCTGTTTGAGAGAGCAATAAAGCAAGAATTTTTATCATCATCCTTCTCAACAACACAAGAATTGTTGGGATCAAGCAGTATGTCAGAGAGTGCTTTTACAGATACTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGGCTCTCAGACTCTCTGACTTTGATGCATCCATTAGCTATGTTCCGGTTGAAAGGTCTGAGCATCGCAGGGAGAAAGAAGCTGTGGAATACATAAAGCTTCCTTCAAGATCTAATCCTTTCAAATCTAGTAGATTGGTGGAACCAGCAGACTTGGACCATGATGAATTCAGGAAATTTAGGTCTGCTCCCATGAAAATTGTACAAAGCGGCAATAAACGTGGGCGGGGGAACAGTGACAAAGGACGGGGTAAAAAGATGGCTAAAAGAATGCATGATTCCAGACAAGATACTGGCCACTGTAGTGTTAAGGTCACGGAGAATCTTAGTCAAAGACTAAAACAACAGGGGCAAGGAACACAAGGACAAAGTGGTGGACGGGGTCGCCGAACTGTCAGGAAAAGACGAGTGGAAAAGAGAACTGTTGAAGATTTGTTGCTGGGCCACAAGGGTGGCACTCACAGTTCCAATATTGGTAGAGAACCACTGAGAAACATGGATGAGGAATGGGATGATGAAAAGGCAAGTCCCATGACTCCCATTCACATGGGGGCAGCAGACACTAGTAACAGTGCCGAGGAGGCAGATTCTGATGACAATGCTCAAGTAGCAGAGTCGGATGACAATGCTGAAGAAGTGGATTCCGATGACAATCCTCTAGATGTGGACTCTGATGACAATGCTCAAGCAGTGGAGTCTGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGGAATAGGTTTCAATAACACCCCCAACAGATGGAGTAGGGATATGGTTGGAGTGATGGATGAGGATGTGGAAGCTTCCGAAGAGGACAATGACAACAATGTTGGGATTGAAGAGAATGAAGAAGAATCAGAGGGTGATGATGTTATGAGTGAGGAGGGTTCAGATGGAATTGCAAAAAGAGTTTTGAATGAAGACGACTCGGATTCGGACTCTGATGACTCTGAAGATTCATCTGATTAG 2760 0.4232 MCDEFSSIGKESLVHKVELIQDQFDKFDKDLPENGSKDENGSKGARLPDAVTGQPVIANFEEDNMEIDESKTGESWVEGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDNVNKSDFPSINGNKVEPQYTSPAVGGNQSPLLDINVDNNNNVNEASPSTAENKKATAAQNFAMEKPLFGQDFCTGPDNPQSQLSAPYSKRSRSQLKSYISHMAEEMSVYRSLPLGQDRRRNRYWQFVASASCNDPGSGRIFVEYLDGNWRLIDSEEAFDALFNSLDLRGIRESHLRIMLQKIGSSFKENVRKNAQSANIGSRGENSIKNEVDETDSSPDCHALSDSPSSTLCGLNSDASETSSSFKIELGKSESEKKGALRRYQDFQKWMWKECYNSSILCAMKYGKMRCKPQVDICDICLNPYFFEDSHCNCCHHTFPSNNGFNFSKHIFQCGGKLSKDICILDSSLPLRTRLLKALLAFIEASVPSEAFQSTWTEDTRRHWGVKLSKSSSVEELLQLLTLFERAIKQEFLSSSFSTTQELLGSSSMSESAFTDTESVAVLPWVPQTTSAVALRLSDFDASISYVPVERSEHRREKEAVEYIKLPSRSNPFKSSRLVEPADLDHDEFRKFRSAPMKIVQSGNKRGRGNSDKGRGKKMAKRMHDSRQDTGHCSVKVTENLSQRLKQQGQGTQGQSGGRGRRTVRKRRVEKRTVEDLLLGHKGGTHSSNIGREPLRNMDEEWDDEKASPMTPIHMGAADTSNSAEEADSDDNAQVAESDDNAEEVDSDDNPLDVDSDDNAQAVESDDNGQAVEYDQGNWGIGFNNTPNRWSRDMVGVMDEDVEASEEDNDNNVGIEENEEESEGDDVMSEEGSDGIAKRVLNEDDSDSDSDDSEDSSD 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90678g00005 919 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 252 324 IPR028941 -
Stsc90678g00005 919 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 20 914 IPR044977 GO:0006357
Stsc90678g00005 919 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 72 115 IPR028942 -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 785 823 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 694 720 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 362 377 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 892 906 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 662 919 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 28 52 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 335 377 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 861 891 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 28 44 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 669 693 - -
Stsc90678g00005 919 MobiDBLite consensus disorder prediction 754 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90678g00005 Stsc-Chr90678 32076 35908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90678g00005 67 849 Homeobox Transcription Factor Family AT1G28420 41.439 2.59e-147 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90678g00005 - - adu:107480767 1530