Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90676g00022 ATGTACGGATTCGAAGCTATGACCTTCAACATCCACGGCGGTTACCTGGAGGCCATTGTCCGCGGCCACCGCGCCGGACTCCTCACTACCGCCGACTACAACAACCTCTGCCAATGCGAATCCCTTGACGACATCAAGATGCACCTCTCCGCCACCGAGTACGGCCCTTACCTCCAAAACGAGCCTTCTCCATTGCATACAACTACCATCGTGGAGAAATGCACTCTTAAGCTGGTTGATGATTACAAGCACATGCTGTGCCAAGCCACTGAACCCTTGTCAACCTTTTTAGAATACATCACATATGGTCACATGATTGACAATGTTGTTTTGATTGTTACTGGCACCTTGCATGAGAGAGATGTTCAAGAACTACTAGAAAAATGTCATCCCCTTGGCATGTTTGACAGCATTGCTACTCTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTTCTTGTTGACACTCCCCTCGCTCCATACTTCTCTGAGTGTATTACATCTGAGGACTTGGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTTTACAAATTCTGTCAGAAATTGGGTGGTACTACTGCTGAGATCATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGAGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTCACCAGAGATGACCGCAGAAAATTGTACTCTAATTTTGGTTTACTTTACCCATATGGTCATGAGGAACTTGCTGTTTGTGAGGACATTGATCAGGTTCGTGCTGTTATGGAGAAATATCCTCCCTATCAGTCTATTTTTGCCAAGTTATCCTATGGAGAGAGCCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTTAAGAGGCTTTGCTTAGCATTTGAGCAACAGTTTCATTATGCTGTATTCTTCGCATACATGAGGTTAAGGGAACAAGAGATCAGGAACCTAATGTGGATTTCTGAGTGTGTGGCTCAGAATCAGAAGTCCAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1056 0.4432 MYGFEAMTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGTTAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90676g00022 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
Stsc90676g00022 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Stsc90676g00022 351 FunFam V-type proton ATPase subunit 91 205 - -
Stsc90676g00022 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Stsc90676g00022 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Stsc90676g00022 351 FunFam V-type proton ATPase subunit 206 309 - -
Stsc90676g00022 351 Gene3D - 206 309 IPR035067 -
Stsc90676g00022 351 Gene3D - 91 195 IPR035067 -
Stsc90676g00022 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Stsc90676g00022 351 FunFam V-type proton ATPase subunit 14 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90676g00022 Stsc-Chr90676 135280 139778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90676g00022 1 351 Primary Pumps ATPases(2) AT3G28710 94.302 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90676g00022 K02146 - tcc:18601456 706.057