Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90676g00007 | ATGGGGTTTGAGAATAATGCAATTAAAGCAGGGAGTTTGGATGTTGGAAAGTCAAAGGGAGGGAAGAAGAAGAAGAAGAAGAATAGAGATGGTGATGGTGATGAGAGTGGGTGTTGCCTTAGATTGAGTTTCATTGGAAGTTGCATACCTTCAAGATCAAAGGTTGATAACTCCATAAGTGGCACCACAACTAGTGCTCATAGTGTATATAAAGCATCTGCATATGAGAGAAGCAAAAGAGAAGCAAGTGCTGCACCAGAGTCCTCAACAACAACTAGTAATGCTGGAAGTGTCCCTTCCACTCCGAAGTTCAGCGAGGAGTTGAAGGTTTCTTCTCGGTTGAGAAAATTCACCTTCAATGAGCTTAAGATGGCAACTAGGAACTTCAAACCAGAGAGTCTTCTTGGCGAGGGAGGGTTCGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAACGGAACTGCGCCTGTGAGACCGGGGACGGGTCTTACTGTTGCAGTCAAGACCCTTAACCATGATGGACTTCAGGGCCACAAAGAGTGGCTTGCTGAGTTAAACATTCTTGGTGATCTTGTCCATCCTAATCTTGTCAAATTGATTGGTTTCTGCATTGAAGATGATCAAAGATTATTGGTTTACGAGTTTATGCCCCGAGGAAGTTTGGAGAACCATCTCTTTAGAAGGTCTATGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTGCATGAAGAAGCTCAGAGGCCCGTAATCTATCGTGATTTCAAGACATCTAACATACTATTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCCGAAGGGGAGAAGACACACATATCTACAAGAGTTATGGGAACATATGGCTATGCTGCTCCTGAGTATGTGATGACGGGACATTTGACGACGAAAAGTGATGTCTATAGTTTCGGAGTAGTGCTACTGGAAATGCTCACTGGCCGCAGATCTATTGATAAGAACAGACCAAATGGGGAACACAATCTTGTGGAGTGGGCAAGGCCTTTTATCTTAGACCGAAGAATGTTCTATCGGATAATTGATCATCGCCTCGAGGGCCACTTCTCCATTAAAGGTGCACAAAAAGCCGCCCAGCTAGCAGCTCAGTGCCTTGCCCGCGATCCAAAATCCAGACCTATGATGAGTGAAGTCGTTCAAGTTCTAAAGCCTGTACAGAACCTCAAGGACATGGCCATCGCGTCTCGCCACTTCCAGTTTGTGCGAGTTGATCGTACCATGTCAATGCCGAATCCTAAAAACGGCATGCAAACACAACTAGGATCATTTTCAAGGAAGGGTCAACCTGTAAGGACCTTGTCAAGTCCAAGGGGTCCACCTGGTTCTCCATTTCATCATCATAGCAAGTCTCCAAAACCTAATGGATAA | 1449 | 0.45 | MGFENNAIKAGSLDVGKSKGGKKKKKKNRDGDGDESGCCLRLSFIGSCIPSRSKVDNSISGTTTSAHSVYKASAYERSKREASAAPESSTTTSNAGSVPSTPKFSEELKVSSRLRKFTFNELKMATRNFKPESLLGEGGFGCVFKGWIEENGTAPVRPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTTKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPFILDRRMFYRIIDHRLEGHFSIKGAQKAAQLAAQCLARDPKSRPMMSEVVQVLKPVQNLKDMAIASRHFQFVRVDRTMSMPNPKNGMQTQLGSFSRKGQPVRTLSSPRGPPGSPFHHHSKSPKPNG | 482 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90676g00007 | 482 | MobiDBLite | consensus disorder prediction | 437 | 458 | - | - | |
Stsc90676g00007 | 482 | Pfam | Protein kinase domain | 131 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90676g00007 | 482 | FunFam | Serine/threonine-protein kinase BIK1 | 96 | 214 | - | - | |
Stsc90676g00007 | 482 | MobiDBLite | consensus disorder prediction | 84 | 104 | - | - | |
Stsc90676g00007 | 482 | PANTHER | OS01G0588500 PROTEIN-RELATED | 85 | 413 | - | - | |
Stsc90676g00007 | 482 | ProSitePatterns | Protein kinases ATP-binding region signature. | 135 | 167 | IPR017441 | GO:0005524 | |
Stsc90676g00007 | 482 | FunFam | Probable serine/threonine-protein kinase PBL8 | 215 | 428 | - | - | |
Stsc90676g00007 | 482 | ProSiteProfiles | Protein kinase domain profile. | 129 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90676g00007 | 482 | CDD | STKc_IRAK | 135 | 411 | - | - | |
Stsc90676g00007 | 482 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Stsc90676g00007 | 482 | Gene3D | Phosphorylase Kinase; domain 1 | 108 | 214 | - | - | |
Stsc90676g00007 | 482 | MobiDBLite | consensus disorder prediction | 434 | 482 | - | - | |
Stsc90676g00007 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 431 | - | - | |
Stsc90676g00007 | 482 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 258 | 270 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc90676g00007 | 482 | MobiDBLite | consensus disorder prediction | 77 | 104 | - | - | |
Stsc90676g00007 | 482 | SUPERFAMILY | Protein kinase-like (PK-like) | 103 | 409 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90676g00007 | Stsc-Chr90676 | 52002 | 55580 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90676g00007 | 77 | 425 | Glycoside Hydrolase | AT3G07070 | 50.704 | 5.11e-114 | 340 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Stsc90676g00007 | Pkinase | 5.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90676g00007 | - | - | gmx:100305393 | 795.808 |