Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90675g00018 ATGAATGGAAAAATCAACTCAAGCTCTAGTGTATCAGATACAAGTGGTGTCAGAGGATCTCGGAGAACTGCATCCTCAAAGAACATGATTCAAAGCCCTTCAAGTGCTCAGAAATCTAATGGACTTATTAAGAGAACATCATCACCCACACCTGCAGTTAAAAGGATGTCTAATAAGGTTGCGAAACAGAACATGCCTAGTCCTTCAGATTCTGAAAGCTCAGGGTCAATGAATTCAAAACAGAAGCCAAAAAAAGAAAAGAGTGTGAAACAGTTGACATTTGAAGCTAAGGAAGTCAATGAAAATGAAGAGCACGATTTGGGAAGTTCACACTTAGAACCAAAGAGAAGGGATGCTCGTTGGTACCGGTCTCTATTTCGAAAACCAAAAAATGGTTGCCTTACGCAGTCAAAGAAGATTGACCAGTCTTCTAAAGAGATTCACTTAAATTGTAAGGAAGCCTCCAAGAATGGTACACTACCTTCTCAAGTTGATTCCAAGTTGACCGGGACCGTGAAAAATCTAGTAGATCCAAAAGTAGGGTCGCTGGTGCCATCTAATGGCACAAACTCTGAGACTAACGAGGTGCCTCAAAGGGTTCAACCTGATACCTGTGGAAATGGGACAGTGCAATTGCCAGAGTCAAGGAATTCCTTACTGGATGAAGATTTAGTTAGGAACGATATTGGGCATGATGATTCAAACTTTCTGGTTTCTGATTGTGTTGGGTTCTCTTGTCAATTAGCATATCTGATTGTGGGTAATATGTTGGATTGTGATCCAGTGATCTCATCTAACCCTTCTACAGCCGAGGGCCGGCTTGGCTCAGCGGTAAGCTCACTTACCGTGGAGTTTGAGGTCGTGGGTTCGAACAGCCTCTCTACGAAAGTAGGGATTCAGGATGCAGCTGATACTGATCCAAGCATATTGCAAAAAGAATATCCTGTAAATTCACCAGAAGAAGTCATAAAACACACATGTCTAATTTGCAAGAAGGGAGGACAGCTACTGTTTTGTGGTGGAAAAGGATGCAGTGGGTGCTACCATTCTTCTTGTCTTGAGCCACCCCTGGTCGATGCCTCCATTGGAGTTTGGCATTGCCATTTTTGCGTGAGGAAGAAGATTGAATTTGGTGTATATTCTGTATCAGAGGGAGTAGAATCAATTTGGGATGCAAAAGAAGTTTCGTCATCAAATTTTGATGGGTCTACTACTACTCAGAAAGAGTATCTAGTGAAATATAAAGGTGTTGCTCATGTTCATAATCGATGGTTACCAGAAAACCAGTTACTTCGTGAAGCTCCTTCACTTCTTACAAACTTTAATATGAAAAATCAGGACCAAAGGTTGAAGCTAGAATGGACTTTACCTCATCGTCTGCTGCAGAAGAGAGCAATAATCAGTTCCTCTCAGCAAGATGATCACAAGATTAAGGACGGAGTTCAAGACTTAAATTGTTTCTGCGAATGGCTTGTGAAATGGCGTGGTCTTGGTTATGAGCATGCTACATGGGAATTGGACAATGGGTTGTTCCTTCGTTCACCTGAAGGTCAGAGGTTAATCAGAGGCTATGAAGAGCGTTTCCAGAGAGCAAAGAGAGATGCTTCTTGTTCCACGGTAAATAATGTGTCACGGTCTTGTTTCCTAAATCCTGATTGGTTTCTATGGCTTTATCTCAACAACCATCTACAGAAAGTAGCCCAAGGAAGCTCTGTGAGTAAATTATGTCAGATGCCAGGTGGAATTTCTTCTGGAGTTGGTAATAACAATTTGGATGCTGTTAATAAACTACGGGAACATTGGTGCAAGGGTCAGAATGCTATTGTAATTGATGACCATGACAGCATCTTGAAAGTGGTTGCATTTATCTTGTCCTTGCAATCATATACTTGTCAACCTTTCCTCATCATCTCAAACCCCAGTTCTCTGCAATCGTGGGAGAATGAGTTCTACCAGTTGGATCCACCTATAGATGTCGTTACTTACAGTGGAAACAAAGAGATTCGTGACTTTATCAGGAGACTTGAATTTCATAATGGAGGAGGTTGTATGCTATTCCAAGTACTCATAACTTCTGCAGAGATCTTCATTGAGGATATAGATTTTTTGCGAGGCATAGAATGGGAAGCAATCATTGTGGATGACTGCCAATCTGCTAAAGTCTCTTCAAATGTTGAAAGTTTTAAGGTCATGAACACACATTTGAGGATTCTTCTTTACCATGGGCAACTAAAGGATAGCATTGAAGAATATATTAATATTCTGTCTCTTCTCAATTGTCAAACTGATTATGAAAAGGATGCTTTAATACCTGATTCTGGTAACAAGATTGATCAACTGAAGGAGCAGCTATCAAGTCATATTGCATCTAAATGCAAGTCTGACCCTGTCAAGTTTATTGAGTATTGGGTTCCTGTTCAGATATCCCATGTGCAACTTGAGCAGTATTGTGCTTCTTTACATTCTAATGCTTCAATTCTTCGTTCCTCAGCAAAGACGGATGTCGATGCCCTTCGTGACATCATCATAACAGCCCGAAAGTGTTGTATTCACCCTTCTATTGTTGATCAAACACTGAAAAGTCGACTTGTTGTTGGCCTTGATGAGGCTGATCTCATTGATGTTGATATAAAAGCTAGTGGCAAGCTGCAACTACTTGATTTATTGCTCACGGAGTTGAAGGCTAAAAACTTAAGGGGCCTGGTTCTTTTTAAGTCTATTGGTGGTTCTGGGAGGGTTTCGTCAGGAGATTTTTTGGATGACTTACTGCGACTAAGGTTTGGTCCAAACTCTTATGAAAGGGTTGATAAAGGTCTTTTATTGTCCAAGCAGAAAGATGCCATGAGGAAATTTAACAACAAGGATGATGGACGGTTTGTATTTTTGTTAGACACATGTGCTTGCCGTTCAGGCATCAGACTGTCCTCAGTTGATACTATTATTATATTTGATAGTGACTGGAACCCAATGAATGACATAAGATCCCTTCAGAAGATAACACTTGATTCACACCCAGAAGTGGTAAATATATTCCGCTTATATTCGTCCTTCACTGTGGAAGAAAATGCCTTGATCCTTGCAAAGCAAGACAGGATACTTGACAGCAATTTACTGAATATAAGCAGGACTACCTGCCAAATGCTGTTGATGTGGGGGGCTGCTTCCCTATTTGATGATTTGAAAATTTTCCATCACAGTGAGACTTCTGTTTTGAGTCAGAAATCTTCATCTGGGGAACAACATCTGGCACAAACAGTCCATGAATTCTCATTGTTGCTATCTCAGGATGTTGAAAATGACCCAAGAAACTGTTCAATTTTATTAAAAGTCTGGCAAAATGGGTCAACATACCAGACAGCTTTTCCTTTGCCTGGTGAGCTGAAACATAGGATACTGGAGAAAGAGACTCCCCATCCTTTTTGGACAGATCTTTTGGAGGGGAAACAGTTTCGGTGGAAGTACTCTTGTAGTTCATCTCAGCGTTGCCGGAAGAGAGTAGATCTTTTTGATATGAGTGGAAGTATGGCAACAAAGCGCCGGAAAGTGAGCAACAATGTTGTTGACCATCCTCCTTCAAAATCTGAAGGTGTTAAGTTATCTAATGGAATCAAGGCAGATAAAGTTAGATTTAATGATGTTGAATCTGAGGAAACAACTAGACTGCGTGAAGAGCAGAGGACTAGACTGTGCGAAGAGCAGAGGAGCTTGCATCTTTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGAAGTTCTTCTTCTTCCTGATAACGTCAGGGATATGGTTGATAATTTTCTTGAATATGTTATGAACAATCATAATGTCGAATGGGTACGAGAATCAGTATCACTGTTACAGGCTTTTCAACTATCATTGATTTGGACTGTTGCTCCACTGCTAAAGCACAAAGTTGATCACAGAGATTCTCTTTTATTTGCAAAACAGCATTTGAATTTTGTCTGCTCGAAAGAAGAGGGTGTGTATAACTACTCTGTTTTACGGTGTCTGAAGGGACTATTTTTACATCGGATGGGAAATTCAAAGGATACTGGTTCTCCAATATCTCCTGAATCATCTAGGAAGGTTTGTTCCAGTAAAGAAGTAGCACAAGAGGTTGAATTGTTTAAAAAAGATGTGTTCCGTAGTATTAGGGAAATACAGAAGAAGTGGCAAAAGAAGTTGAAGATACTTAAACGGATGCAACTAGAAGAGAGGAAAAGTTTAGAGACAGCTTTTGAGGATGAAAAGGCGGAATTTGAGAAAAAGTACAAAATAGAGTTATTAGTTGCTCGGACCTGCTCTCCAAATGATGTCATGAAAACAGAGAAGCTCAAGGTCTTGACCACTGAATTTGGTAAAAAAATTGAAGAACTAAAACGTGAGCATGAAACACGTCTGAAGGCTCTTGAGGACACACATGTGGCTGCTAGGCAGGACTTTAAATATAGTGAAGACACATGGGTACAAGATGTAGAGGATTGGGCAAAAAATGAATTGTCAAACATAGATGCTTCGAAGGAACTTGGGACGGGGTTTGAATACACACAGCTGTTTGATCAGGAAAATGCTCACAAGGGTTCAGAGGGTACGGCCCCTGTGTCTGATCATTTGACTGACAAGAAGGATCACGATAGCACAATTGAAGCCATGACTAATGATGTTCAGGATGAAGTTCATTCTTCTGCACAGAGTAAATTAGATGGGGCTGTTTCAAGCATGTCTTGTGAGAATGCCGTGCAAACCCGTGGGGCTGATAATGGTTCGGATAATGCTACCACTGAAACTTCACCTTTATCTAATGAAGGAATTGGTGATGGGGCCATGGTAGGCATACTGAATAGAGATGCACCTGGAATGCCTACCACCGATGCTGCTCCTGATTGTCTGGAAAATGCTTGCCCTCCTCCATCTATGGAGCAAGTACGTGATGGAGGTTTAAATGAAATTTTAGATGGATGTGCTACCCCAGAAACTAGCCACAATGAGGGCAGAGTAAGCGTATTGGGAAGAGAGGTACCTGTGCAAGTGGAAACACCTAGGATGGCCAATTTTAGTGACTGTCCTGTAAACGCTGCTGCTGTGAATCATTTCTCATCTGTGGATCAAACCCCTGATAAAGGACCTATAAATGTTGCAGATAGTAGTGTCTCATCATTCAGGTCTTGTCAAGCTGATGATCCGGATAAAGTTTCCCTTCCAAATCCACGTTTGGTACAAGTTACTGATGCAGTCTCTTTGAATGTACCTGATGGAGATACTCCAGTTACGATGCCAGAAAATAGTCATGAAGTGGCTGGTTCTGATAATGATACGAGACCTTCAGCAGACAAAATGTCCGTGGATAAAAGTAGTACTGTACCAGCCCAGCTGGAAGGAGTACAGCAATCACCATCTCTGGAAGCCCCTCCTGCTCAGGATACCGCTGGAGAAGTGCATAATTCTTCTGAACGAGCTGAGGTAGTATCTGATCCAGTTGGTGTTGTCCCAGCTAATCAATCAAATCAAGTTTCATGCATCCTGCAGCCTTCAGAGAATGTAGTTGAACATCAGCCGAACAGAAATGATGATCTCCCCCACAGTGAAGCAGAGACTTCAGCTGTGGTTCCAAATCAGGATGTTGTGCAAGCTAACTCAATTTTCGAGCTTGGTTCACACTCACATGCGGTGGTGGACTCTGTCCTAAATTCGGGCCATGATTCACTTGGACCTGTTGGTGTCAGAACAGAGGTTTCAAACTCGACAAATTTGTCAACTCCTCCAGAAATAAACAATCATCCTATACAAACTGCAACTCATTCAGCTTCTAGAATGCCTCCGCCGTTGTGCGCCGATCCACTTAAAAATGAATTGGAAAGAACAAGAAAAATTATCGAACAATTGACAAAAAACCATGAAGAGACGAGATCTCAATTGAAATCTGATTTCGGAAAGGAATTGGAGGCACTTCGCAGGAAGTATGATATTAAATTTCAATTGATTCAGAATGAATTTCAACAAAAGAAGAACAACTTGGATTCAAGTTACCGCACAGTTTTGCTAAATAGGATCTTGGCGGATGCTTTTAGGTCCAAATGCATGTATCGTAAAATGTCTGATGCATATGGAGTGCAGCAAGGTGCAGGTGTTGCCCAGCAGTCAGTTCAGCTTGCAAGACAACAAAGTGGTACTTTTCCTTCCCATGTTGTTGATGGTTCATCTTCCCAGGGACCACTTTCTGCCAATCTTCATAGTCCATCTGCTTTGGTTAGCTCTCAGAATTCGCTCCCACCTTCAAATGCTGCTTACAATACACCAAGAATTCTCTCCAATCCTCCTGCAAGACTTCCTCCTCCTCTAAACTGCAATTCTTCACCCTCTGGGAGTTTTCCAGTTGCCAGTGAGATGCGAGCCCCTGCACCACATCTCCAGCCTTTTAGACCCTCAACACCAATGCTGGCTGCTAACCACCCTGCTCTTCTTCATGGGATGCCAAATCAGCCCACACCTATGAACGTACCTGTGATCGCTCCCACATTGTCTCGTGGTCCAGCCCAACCAACTCTACCAGCATATCAGTCTGTTGGGTTTTCCACTCTTAGCTTGCGTGCCACAGGTTTACGTGCAAATGGCAACACTCAATCTACTGTTTGTCTCCCAAAAGTTCAGCCAAGTATGTCTGAAGTGGTTTCTTTGAACCCCCCTAGAATTGGCTCCAGCGTTGATGTGACGCCTAACTCACCCAGTCAAGCTGCATCTCCTGAATTAGTCTGTTTATCAGATGATGAGGATGAGTGA 6771 0.4196 MNGKINSSSSVSDTSGVRGSRRTASSKNMIQSPSSAQKSNGLIKRTSSPTPAVKRMSNKVAKQNMPSPSDSESSGSMNSKQKPKKEKSVKQLTFEAKEVNENEEHDLGSSHLEPKRRDARWYRSLFRKPKNGCLTQSKKIDQSSKEIHLNCKEASKNGTLPSQVDSKLTGTVKNLVDPKVGSLVPSNGTNSETNEVPQRVQPDTCGNGTVQLPESRNSLLDEDLVRNDIGHDDSNFLVSDCVGFSCQLAYLIVGNMLDCDPVISSNPSTAEGRLGSAVSSLTVEFEVVGSNSLSTKVGIQDAADTDPSILQKEYPVNSPEEVIKHTCLICKKGGQLLFCGGKGCSGCYHSSCLEPPLVDASIGVWHCHFCVRKKIEFGVYSVSEGVESIWDAKEVSSSNFDGSTTTQKEYLVKYKGVAHVHNRWLPENQLLREAPSLLTNFNMKNQDQRLKLEWTLPHRLLQKRAIISSSQQDDHKIKDGVQDLNCFCEWLVKWRGLGYEHATWELDNGLFLRSPEGQRLIRGYEERFQRAKRDASCSTVNNVSRSCFLNPDWFLWLYLNNHLQKVAQGSSVSKLCQMPGGISSGVGNNNLDAVNKLREHWCKGQNAIVIDDHDSILKVVAFILSLQSYTCQPFLIISNPSSLQSWENEFYQLDPPIDVVTYSGNKEIRDFIRRLEFHNGGGCMLFQVLITSAEIFIEDIDFLRGIEWEAIIVDDCQSAKVSSNVESFKVMNTHLRILLYHGQLKDSIEEYINILSLLNCQTDYEKDALIPDSGNKIDQLKEQLSSHIASKCKSDPVKFIEYWVPVQISHVQLEQYCASLHSNASILRSSAKTDVDALRDIIITARKCCIHPSIVDQTLKSRLVVGLDEADLIDVDIKASGKLQLLDLLLTELKAKNLRGLVLFKSIGGSGRVSSGDFLDDLLRLRFGPNSYERVDKGLLLSKQKDAMRKFNNKDDGRFVFLLDTCACRSGIRLSSVDTIIIFDSDWNPMNDIRSLQKITLDSHPEVVNIFRLYSSFTVEENALILAKQDRILDSNLLNISRTTCQMLLMWGAASLFDDLKIFHHSETSVLSQKSSSGEQHLAQTVHEFSLLLSQDVENDPRNCSILLKVWQNGSTYQTAFPLPGELKHRILEKETPHPFWTDLLEGKQFRWKYSCSSSQRCRKRVDLFDMSGSMATKRRKVSNNVVDHPPSKSEGVKLSNGIKADKVRFNDVESEETTRLREEQRTRLCEEQRSLHLLLKPEIRKLCEVLLLPDNVRDMVDNFLEYVMNNHNVEWVRESVSLLQAFQLSLIWTVAPLLKHKVDHRDSLLFAKQHLNFVCSKEEGVYNYSVLRCLKGLFLHRMGNSKDTGSPISPESSRKVCSSKEVAQEVELFKKDVFRSIREIQKKWQKKLKILKRMQLEERKSLETAFEDEKAEFEKKYKIELLVARTCSPNDVMKTEKLKVLTTEFGKKIEELKREHETRLKALEDTHVAARQDFKYSEDTWVQDVEDWAKNELSNIDASKELGTGFEYTQLFDQENAHKGSEGTAPVSDHLTDKKDHDSTIEAMTNDVQDEVHSSAQSKLDGAVSSMSCENAVQTRGADNGSDNATTETSPLSNEGIGDGAMVGILNRDAPGMPTTDAAPDCLENACPPPSMEQVRDGGLNEILDGCATPETSHNEGRVSVLGREVPVQVETPRMANFSDCPVNAAAVNHFSSVDQTPDKGPINVADSSVSSFRSCQADDPDKVSLPNPRLVQVTDAVSLNVPDGDTPVTMPENSHEVAGSDNDTRPSADKMSVDKSSTVPAQLEGVQQSPSLEAPPAQDTAGEVHNSSERAEVVSDPVGVVPANQSNQVSCILQPSENVVEHQPNRNDDLPHSEAETSAVVPNQDVVQANSIFELGSHSHAVVDSVLNSGHDSLGPVGVRTEVSNSTNLSTPPEINNHPIQTATHSASRMPPPLCADPLKNELERTRKIIEQLTKNHEETRSQLKSDFGKELEALRRKYDIKFQLIQNEFQQKKNNLDSSYRTVLLNRILADAFRSKCMYRKMSDAYGVQQGAGVAQQSVQLARQQSGTFPSHVVDGSSSQGPLSANLHSPSALVSSQNSLPPSNAAYNTPRILSNPPARLPPPLNCNSSPSGSFPVASEMRAPAPHLQPFRPSTPMLAANHPALLHGMPNQPTPMNVPVIAPTLSRGPAQPTLPAYQSVGFSTLSLRATGLRANGNTQSTVCLPKVQPSMSEVVSLNPPRIGSSVDVTPNSPSQAASPELVCLSDDEDE 2256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 60 78 - -
Stsc90675g00018 2256 SMART PHD_3 326 371 IPR001965 -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1744 1818 - -
Stsc90675g00018 2256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 770 IPR027417 -
Stsc90675g00018 2256 Coils Coil 1942 1969 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1 54 - -
Stsc90675g00018 2256 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 885 1049 IPR001650 -
Stsc90675g00018 2256 Gene3D - 382 446 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 2053 2103 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 2053 2098 - -
Stsc90675g00018 2256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 378 IPR013083 -
Stsc90675g00018 2256 ProSiteProfiles Chromo and chromo shadow domain profile. 461 536 IPR000953 -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 179 202 - -
Stsc90675g00018 2256 ProSiteProfiles Zinc finger PHD-type profile. 324 373 IPR019787 -
Stsc90675g00018 2256 ProSitePatterns Zinc finger PHD-type signature. 327 370 IPR019786 -
Stsc90675g00018 2256 ProSiteProfiles Chromo and chromo shadow domain profile. 384 453 IPR000953 -
Stsc90675g00018 2256 Pfam SNF2-related domain 617 854 IPR000330 GO:0005524|GO:0140658
Stsc90675g00018 2256 SMART chromo_7 453 529 IPR000953 -
Stsc90675g00018 2256 SMART chromo_7 383 446 IPR000953 -
Stsc90675g00018 2256 Coils Coil 1451 1478 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1552 1599 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 2227 2256 - -
Stsc90675g00018 2256 PANTHER HELICASE PROTEIN MOM1 8 2254 IPR039322 GO:0031507
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1717 1736 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1777 1801 - -
Stsc90675g00018 2256 SUPERFAMILY Chromo domain-like 487 527 IPR016197 -
Stsc90675g00018 2256 Gene3D - 447 527 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1 90 - -
Stsc90675g00018 2256 Gene3D - 1942 2023 - -
Stsc90675g00018 2256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 799 1039 IPR027417 -
Stsc90675g00018 2256 SUPERFAMILY FYVE/PHD zinc finger 317 374 IPR011011 -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 2227 2245 - -
Stsc90675g00018 2256 Gene3D - 590 799 IPR038718 -
Stsc90675g00018 2256 Gene3D - 800 1034 IPR027417 -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 1552 1642 - -
Stsc90675g00018 2256 MobiDBLite consensus disorder prediction 183 202 - -
Stsc90675g00018 2256 SUPERFAMILY Chromo domain-like 343 447 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90675g00018 Stsc-Chr90675 125015 138513 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Stsc90675g00018 SNF2_N 9.1e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90675g00018 - K11643 aip:107610432 2142.47