Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90675g00009 ATGTCGCCGGAATTTCAGTCCACCGGCGTGGCGACGCAGAAGTCCGACGTATACGCGTTCGGAGTGGTGATTCTGGAGCTTCTCTCCGGGGAGGAGCCGCTGAGATTCAGGTACGACAAGAAGAGTGGAGAGTTTGTGAGGACATCGGTAATCGACGCTGCGAGGGCTGCCGTGGACGGTGGTGAGGGGGCGCTGAGGAGGTGGGTGGATAGGAGACTGAAAGACTCGTTCCCGGTTGAGGTTGCGGAGAAGGTGACACGGGTCGCATTGGATTGCGTACACGTGGACCCCGATAAGAGGCCCAAGATGGGTCGCGTAGCTGACAAGATATCTAAGCTGTATTTGGAATCAAAGATTTGGTCTGATAATGTTAGAATGCCCACTGAAATTTCTGTTTCTTTGGCTCCTCGATGA 414 0.5435 MSPEFQSTGVATQKSDVYAFGVVILELLSGEEPLRFRYDKKSGEFVRTSVIDAARAAVDGGEGALRRWVDRRLKDSFPVEVAEKVTRVALDCVHVDPDKRPKMGRVADKISKLYLESKIWSDNVRMPTEISVSLAPR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90675g00009 137 Pfam Protein tyrosine and serine/threonine kinase 1 109 IPR001245 GO:0004672|GO:0006468
Stsc90675g00009 137 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Stsc90675g00009 137 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90675g00009 137 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Stsc90675g00009 137 PANTHER OS09G0572100 PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90675g00009 Stsc-Chr90675 83134 83547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90675g00009 1 130 Receptor kinase-like Gene Family AT1G21230 31.061 7.03e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc90675g00009 PK_Tyr_Ser-Thr 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90675g00009 - - cave:132164263 228.409