Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90674g00001 ATGCTTCATGAGGTGAAGAATCGGATTAAAGTAATCAAGTCCACTGTTCGAAGTATCTATGAAAACAAAGACTTTTATGGCATCAACGAAATAGATTTCAAGAGTGGTACTTCAGAAGGAGTAGGTGCAGAGTATCTCCACAGGAGAAGGAGGGATGTGGAAGAAAAAGAAGTGGTGGGGTTGGTGAATGAGTCCAATGTGGTTATTCAGAAGCTCAAGGAGCGAGATCCTAATCTTAATGTGGTTTCCATAATTGGCATGGGTGGGTTGGGAAAGACCACTCTTGCTAAGAAGATCTACAACAAGGATGAGGTGAGGGGCATGTTTTCTTGCTGTGCTTGGAGTTATGTGTCCAATGATTACATAATTAGGGATCTACTTTTGAGCCTTTTGAAATGTTTGAAGTCATCCATGGATGAATGTAAAGATTTGAGTGTGGAGGAGTTGAAGGAGAAGCTACATGAATGCTTGAAGGGGAACAAGTATTTGGTGGTGCTTGATGACATTTGGAAAACTCAGGTGTGGGATGAGTTGAGAGGGGTATTTCCAGACGACAAAAACGGGAGCAGAATAATTATAACAAGTCGTTTAAGAGAGGTGGCATTGTATAGCAAGGCATCTTTTGTGTATGATCTTCCCTTCCTTGATGAAGAAGTAAGTTGGAAACTGTTCTCCAAGAAGATCTTTGGAGATAAAGAGTGTCCATCTGATCTAGAGCCTCTGGGTAGAGCAATGGCTACAAATTGTAAGGGATTACCCCTTGCCATTGTAGTGTTAGCGGGGCAAGTTGCAAAAAAAGAGCGGTCTGAAAGAGAATGGCGTAAAATCAAGGATTATGTCAATTGGCATCTTGCTCAAGACAAACTGGTGGAAAGAATATTGAAGCTTAGCTATGATGACTTGCCTCCAGAACTGAAGCCATGCTTCTTATATTTGGGGATGTATCCGGAAGATTATGAGATACCTGTGAGGATATTATGCCAATTGTGGATAGCTGAAGGGTTCATTCAAGCAAAAGAAGTTAGAGCATCAAATTCACCAAAACCAGAAGATATTGCTGACATGTATTTAGATATGCTTGTGGAACGGAGCTTGGTGCAAGTGGCTAGTAGGAGGAGCGATGGGGGTGTGAAAACATGTAGAATTCATGATCTTCTCCAGGACCTCTGCATTTCAGAGAGCAGAGAAAACAAGTTTATCGAAGTGTGCACAGAGTTGGATGCTAATGAGTCTAATAATCCTCGTAGGATGTCTCTCCAGTATAGAAAAAGGTCATTGCCAGCAGCCAAAGATAACCAATCACAATCACATTCACATACACGCACTTTGCTGTATAGCGAATCACAAGGGTGGAATCAGATAAGCAATGGCTTTAAGTTGGTTCGTGTATTGGACATGAACAAGGTGGCGCTGCATTCATTTCCAAGTGGATTGAACACATTGATCCATCTAAGCAAAATATGGAAGCTCAACTCACTCAAGCATATTTATATAAAATATAATCACTTATCAACGATACTTCCTCGAGGAGGAGCCTCAATGCGGAGGAGGATGAAAATTGGCGAAACAAGGGTGGAGAATATCCAGACTCTGGGTTACATCTTTGTCGAAGCACAAACAGCAAGCCTACTAAGCAAGTACATGTTCCCCAACTTGACAAAAGTAACTTTATGTGGAAGGTGTGAAGAGCAAGAAGTAGAAGTACTAGGGAAGATTCTGCCGTTCCTAAACAAACTCCGTAAGCTAAAGCTAGTTAACGTGTGGAGTATTCCATTAGTTCCGAATGTGATTCCTGTAAGTCTTATCAAGATTACCATTCGTAGCTTTGAACATCTACATTCGAGATTGATCAAGACTCTGGGACAGCTTGCCGACCTGCAAATCTTGAAACTATATGGAGGACATATATATGGCGGGGATGTTTGTTGCGCAGCTGGGGACTTCCCACAGCTTCAAGTGCTGAAAATGAATGATGTTTTCATGGACAATGGCAGGTGGAAAATAGAAGAAGGAGCAATGCCTTGCATTTCTATGTGTTATGATCCCAGACGACTTCTCAGCAACTAA 2067 0.417 MLHEVKNRIKVIKSTVRSIYENKDFYGINEIDFKSGTSEGVGAEYLHRRRRDVEEKEVVGLVNESNVVIQKLKERDPNLNVVSIIGMGGLGKTTLAKKIYNKDEVRGMFSCCAWSYVSNDYIIRDLLLSLLKCLKSSMDECKDLSVEELKEKLHECLKGNKYLVVLDDIWKTQVWDELRGVFPDDKNGSRIIITSRLREVALYSKASFVYDLPFLDEEVSWKLFSKKIFGDKECPSDLEPLGRAMATNCKGLPLAIVVLAGQVAKKERSEREWRKIKDYVNWHLAQDKLVERILKLSYDDLPPELKPCFLYLGMYPEDYEIPVRILCQLWIAEGFIQAKEVRASNSPKPEDIADMYLDMLVERSLVQVASRRSDGGVKTCRIHDLLQDLCISESRENKFIEVCTELDANESNNPRRMSLQYRKRSLPAAKDNQSQSHSHTRTLLYSESQGWNQISNGFKLVRVLDMNKVALHSFPSGLNTLIHLSKIWKLNSLKHIYIKYNHLSTILPRGGASMRRRMKIGETRVENIQTLGYIFVEAQTASLLSKYMFPNLTKVTLCGRCEEQEVEVLGKILPFLNKLRKLKLVNVWSIPLVPNVIPVSLIKITIRSFEHLHSRLIKTLGQLADLQILKLYGGHIYGGDVCCAAGDFPQLQVLKMNDVFMDNGRWKIEEGAMPCISMCYDPRRLLSN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90674g00001 688 Gene3D Ribonuclease Inhibitor 411 670 IPR032675 -
Stsc90674g00001 688 Gene3D - 41 207 IPR027417 -
Stsc90674g00001 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 312 IPR027417 -
Stsc90674g00001 688 Gene3D - 298 393 IPR036388 -
Stsc90674g00001 688 Gene3D - 214 297 IPR042197 -
Stsc90674g00001 688 PRINTS Disease resistance protein signature 156 170 - -
Stsc90674g00001 688 PRINTS Disease resistance protein signature 249 263 - -
Stsc90674g00001 688 PRINTS Disease resistance protein signature 81 96 - -
Stsc90674g00001 688 SUPERFAMILY L domain-like 372 659 - -
Stsc90674g00001 688 FunFam Probable disease resistance protein At1g61300 43 207 - -
Stsc90674g00001 688 FunFam Probable disease resistance protein At1g63360 298 392 - -
Stsc90674g00001 688 PANTHER DISEASE RESISTANCE PROTEIN RP 6 656 IPR044974 GO:0006952
Stsc90674g00001 688 Pfam NB-ARC domain 66 299 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90674g00001 Stsc-Chr90674 9086 11277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90674g00001 69 389 WRKY Transcription Factor Family AT5G45050 25.994 1.06e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90674g00001 - - aip:107635641 721.85