Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90673g00033 ATGGAACCATACCGTTATTCTCCCAAGGGAAGTGGAGCCTTATATTGGGAATCCTGTAGATCTCAATTGGAGGGATCAACATCATTAGATGGTGATATGAGCAATTCAATTTCAGATGATATGGCTTGTCGCTTCTCCGAGCTCATGAATTTTGATCCTTATGCTGGCTTGTGCAATAACCCGTCCATCGACCGGGTTTTCAGTAATGGCCTTCCATCAACATATCCATCTACCCCTGGGTTTAATCTAGAGGAACACAACAGTAGCCAATTCTTCATGACAGAAATGAATGGAAATTTCAACACTAAGCAAGGCTCCCCTGGTTATGGGGAAAAATTTACTTTTCAACAAATGGACACCCTACTTGGTTTCTTTGATAGTACAGATGATATACATAGTTTAAGTTCTAAGCAAAAAACTAATGGCTCTTCTCAACATCTTGATACCTGTGACGCCATTGGCAATTATATCGTGACGAAGCCACCTAGTTTGTCACTTGATGAGAGAATGTTGAAAGCCTTGTCCTTCTTGATGGAATCAGCTGGTGGTGGAATATTAGCACAGGTTTGGGTTCCTATAAAGGATGGTGATCAATTTTTCTTGAGCACAAGTGAACAACCTTATCTACTAGACCAAATTCTTGCCGGATATCGTGAAGTCTCAAGAAAATACACATTTTCTGCTGAAGGAAAATCGGGTTCTTTCCCAGGACTTCCTGGTCGTGTGTTTATGTCCAAAACTCCTGAGTGGACTTCCAACGTTGGTTATTACAATAAGAATGAGTACTTGAGGATGGATCATGCGATTAATCACGAGGTTCGTGGATCAATTGGTTTACCCATATCTGATATGCACTCTGAACTGCCATGCTGTGCTGTACTAGAGCTTGTCACTACAAATGAGAAGCATGATTTTGACAAGGAAATGGATATTGTTTGTCATGCACTACAGAATGTAGATCTAACTGCTAATATGCCTCCTCGGCTTCTTCCTCAGTATCTTTCAAATGGCAAACGTGCTGCTTTAACGGCCATAATTGATGTCTTACGATCCATTTGTCATGCGCATAGATTGCCACTGGCACTAACATGGATTCCTTGTTGTGTCAATGAAGACACAGAAGGTAAAGATACAAGGATACACATTAAAGAGAGTCGTTCGAATCCTCATGAAAAGAACATTCTGTGCGTCGAAGAATCTGCATGCTATATAACTGATAATGCAATGGAAGGATTTGTTCATGCTTGCATTGAACACCATCTTGAGGAAGGGAAAGGTATAGCTGGGAGAGCTCTTAAATCAAATCATCCTTTCTTTTGTCCTGATGTGAAGGCATATAATATTAGTGAATATCCACTTGTTCATCATGCGCGCAAGTACAACTTGAATGCTGCAGTTGCAATTAGGCTGAGGAGTACTTATACTAATGATGATGATTACATACTGGAATTCTTTTTGCCTGTCAACATGAAAGGGAGTTCAGAGCAGCAACTTCTCTTAGACAACCTCTCAGGTACCATGCAGAAAGTTTGTAGGAATTTAAGAACAGTTTCAGATGAGGAATTATCGAGAATGGAAGGCTCGCAGGTAGGAATTGAAAACAAAAATGTCCCAGGAATTTTTCCTATGTCCAGGAGAAACTCCCAGATACCATTAACAAACAGTAATCATGATTCAGTCAGTAAGATGTCCATCAAGGAATCTTACCATGGAAACAGTGGAATTGAGTCTTCTCATAACCAGGAAAGGAATGGATCAAGAAGGATGGTTGAGAAAAAGAGAACAGCTGAGAAGAAAGTTAGTTTGAGTGTTCTTCAGCAACACTTTTCTGGTACTCTAAAGGATGCTGCTAGGAGCATTGGTGGTTAG 1869 0.404 MEPYRYSPKGSGALYWESCRSQLEGSTSLDGDMSNSISDDMACRFSELMNFDPYAGLCNNPSIDRVFSNGLPSTYPSTPGFNLEEHNSSQFFMTEMNGNFNTKQGSPGYGEKFTFQQMDTLLGFFDSTDDIHSLSSKQKTNGSSQHLDTCDAIGNYIVTKPPSLSLDERMLKALSFLMESAGGGILAQVWVPIKDGDQFFLSTSEQPYLLDQILAGYREVSRKYTFSAEGKSGSFPGLPGRVFMSKTPEWTSNVGYYNKNEYLRMDHAINHEVRGSIGLPISDMHSELPCCAVLELVTTNEKHDFDKEMDIVCHALQNVDLTANMPPRLLPQYLSNGKRAALTAIIDVLRSICHAHRLPLALTWIPCCVNEDTEGKDTRIHIKESRSNPHEKNILCVEESACYITDNAMEGFVHACIEHHLEEGKGIAGRALKSNHPFFCPDVKAYNISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMKGSSEQQLLLDNLSGTMQKVCRNLRTVSDEELSRMEGSQVGIENKNVPGIFPMSRRNSQIPLTNSNHDSVSKMSIKESYHGNSGIESSHNQERNGSRRMVEKKRTAEKKVSLSVLQQHFSGTLKDAARSIGG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90673g00033 622 PANTHER PROTEIN NLP8 104 621 IPR045012 GO:0003700
Stsc90673g00033 622 MobiDBLite consensus disorder prediction 581 599 - -
Stsc90673g00033 622 MobiDBLite consensus disorder prediction 568 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90673g00033 Stsc-Chr90673 145009 148243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90673g00033 3 621 NLP Transcription Factor Family AT2G43500 49.447 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90673g00033 - - aip:107613413 1106.66