Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90673g00029 ATGGGGAGAATGAAGTGCATGGCTATGCCCTTAGTAGCACTTGCATTGCTGAGTTTGTTTCTTTGGACAGCAGATGCATCTGGTGCACCTCCAAAGCCCAGGTTGCAGTGGCATTACTACAGGAACTCGTGTCGTTATGCCGAGGAGTACGTCCGCCACCAAGTTCATCTATACTGGAACACAGACAAAACCATTGCTCCGAAGCTTGCTCGCTTGGCCTATTCAGATTGTTTCGTCAACGGTTGTGATGGATCGATATTGCTTGACGAAGGACCCAATCCGGAGAAGAAGGCACCACAGAACCGGGGGCTTGGAGGTTTCGTGTTGATTGACAAGATCAGAGAAGTGCTGAATTCGCGATGCCCCGGAGTTGTCTCTTGTGCTGATATACTCCAGCTTGCTACTAGGGATGCTCTGAATCTGACAGGTGCACCAAGTTATCCAGTTTTCACAGGAAGAAGGGATGGTATGAAATCGGATGCTGCATCAGTAGACCTACCATCACCAGACATCACATGGCAAAAAGGTCTATCATACTTCCAATCAAAGGGATTGAATGTGCTAGACATGACCACACTCTTAGGTGCACACTCACTAGGGCAAACACATTGTAGCTATGTTGTTGATAGGCTGTACAACTTCAATGGTAGTGGAAAGCCAGACCCAAGCATGAATGCTACTATTCTTAACTCCTTGAGAAAACAATGTCCACCTAGAAAGAAGGGAGACCATGACCCATTGGTGTACCTAGACCCAGAATCTGGACCCAAATACAAGTTCTCAGAATCATACTACAAAAGGATCTTAACGCGGGAAGCTGTATTGGGAATTGATCAACAATTACTGTATGGTAGTGACACTGAACAGATCACTGAGGAATTTGCTGCAGGATTTGAAGATCTTCGGAAAGCTTTCGCCGAATCTATGTACAAGATGGGGAACATCAACGTTTTAACCGGAAACCAAGGAGAGATACGCCAAAATTGTCGATACACAAACAAGGGCAAAAGCAATTGA 1017 0.4572 MGRMKCMAMPLVALALLSLFLWTADASGAPPKPRLQWHYYRNSCRYAEEYVRHQVHLYWNTDKTIAPKLARLAYSDCFVNGCDGSILLDEGPNPEKKAPQNRGLGGFVLIDKIREVLNSRCPGVVSCADILQLATRDALNLTGAPSYPVFTGRRDGMKSDAASVDLPSPDITWQKGLSYFQSKGLNVLDMTTLLGAHSLGQTHCSYVVDRLYNFNGSGKPDPSMNATILNSLRKQCPPRKKGDHDPLVYLDPESGPKYKFSESYYKRILTREAVLGIDQQLLYGSDTEQITEEFAAGFEDLRKAFAESMYKMGNINVLTGNQGEIRQNCRYTNKGKSN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90673g00029 338 Gene3D - 38 333 - -
Stsc90673g00029 338 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 FunFam Peroxidase 167 312 - -
Stsc90673g00029 338 Pfam Peroxidase 51 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 Gene3D Peroxidase, domain 2 167 312 - -
Stsc90673g00029 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Stsc90673g00029 338 CDD secretory_peroxidase 35 332 IPR033905 GO:0004601|GO:0042744
Stsc90673g00029 338 SUPERFAMILY Heme-dependent peroxidases 35 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PANTHER PEROXIDASE 25-RELATED 17 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90673g00029 338 ProSiteProfiles Plant heme peroxidase family profile. 34 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90673g00029 Stsc-Chr90673 133186 134925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90673g00029 4 333 Peroxidase AT2G43480 62.874 4.23e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90673g00029 K00430 - gmx:100797875 481.485