Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90673g00024 ATGCACAACAACAACAACAACAACTCAACGATCAGCCGTTGCTCTTCTGATTCCGGTGAGCCACCATGTGAGGATGGTAAATGGGCTTCCAAGCTCCTCAAGGAGTGTGCCATAGCAATCTCACAAAGAGACTCCACCAAAATCCACCACCTTCTATGGATGCTCAACGAACTCGCTTCCCCTTACGGCGACTTGGATCAGAAACTCGCCTCTTACTTCCTCCAAGCCTTGTTCTGCAAGGCCACGGAATCCGGCAACCGTTGCTACAAGACTCTCTCAACCGTCGCTCAAAAGAGCAACACCTTCGACTCCGCAAGAAAATTAATTCTTAAATTCCAAGAGGTGTCCCCTTGGACTACCTTCGGCCACGTGGCAGCCAACGGCGCGATTCTTGAAGCCTTGGAAGGCGAGCCCAACCTCCACATAATTGACCTCAGCAACACGCTTTGCACCCAGTGGCCAACGCTGTTCGAGGCATTGGCCACCAGAAACGATGAAACTCCTCGTCTCAGGCTTACCGTGGTCGCGAGCGTGATCACGGTAAACTCTGTGATGAAGGAGGTTGGACAAAGAATGGAGAAGTTCGCGAGGCTCATGGGAGTTCCCTTCGAATTCAACGTAATCAGTGGCCTCGATCGCCTCGGAGATCTCACGAAAGAATCGTTAGGGGTTACCAACGACGAAGCAATCGCCGTGAATTGCATCGGAGCTTTGAGGCGAATCGAGGTTGAAGAAAGGGAATCGGTTATTCGCATGTTCAGATCGCTGAGTCCGAAAGTCGTAACCGTCGTTGAGGAAGAAGCCGATTTCAGCAGCAATCGAAACGACTTCGTTCCGTGCTTTGAAGAGTGCCTTAAATTCTATAGCGTGTACTTCCAGATGCTGGAAGAGAGTTTTCCATTAACGAGCAACGAAAGGTTGATGCTGGAGAGGGATTGTTCGAGAAGCATAGTTAGGGTTTTAGCCTGTAACGGTGATGATGATGAAGAGCTTCAAGATTGTTGTGAGAGAAGAGAGAGAGGGATACAGTGGTGTGAGAAGCTGAAGAGGGAGTTTTCAGCAGCAACGTTCAGCGATGATGTTGTTGATGATGTTAAAGCATTGCTCAAGAGATACCGTGGAGGTTGGTCACTGGTTTTACCACAACAACAACAAGAACAAGGAGGACATAATAGTAATTACAGTGATAATAATAATAACAATCTCTCAGGAATTTACTTGACATGGAAGGATGAACCTGTAGTTTGGACATCGGCATGGAAACCCTAG 1269 0.4823 MHNNNNNNSTISRCSSDSGEPPCEDGKWASKLLKECAIAISQRDSTKIHHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGNRCYKTLSTVAQKSNTFDSARKLILKFQEVSPWTTFGHVAANGAILEALEGEPNLHIIDLSNTLCTQWPTLFEALATRNDETPRLRLTVVASVITVNSVMKEVGQRMEKFARLMGVPFEFNVISGLDRLGDLTKESLGVTNDEAIAVNCIGALRRIEVEERESVIRMFRSLSPKVVTVVEEEADFSSNRNDFVPCFEECLKFYSVYFQMLEESFPLTSNERLMLERDCSRSIVRVLACNGDDDEELQDCCERRERGIQWCEKLKREFSAATFSDDVVDDVKALLKRYRGGWSLVLPQQQQEQGGHNSNYSDNNNNNLSGIYLTWKDEPVVWTSAWKP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90673g00024 422 MobiDBLite consensus disorder prediction 1 21 - -
Stsc90673g00024 422 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 411 IPR005202 -
Stsc90673g00024 422 ProSiteProfiles GRAS family profile. 20 421 IPR005202 -
Stsc90673g00024 422 Pfam GRAS domain family 31 421 IPR005202 -
Stsc90673g00024 422 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90673g00024 Stsc-Chr90673 104234 105502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90673g00024 2 422 GRAS Transcription Factor Family AT4G37650 48.307 1.04e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc90673g00024 GRAS 4.4e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90673g00024 - - ahf:112773020 731.48