Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90673g00019 ATGGAGAAGGACAAACCTCTTGTTCATGGTGGAGGTCTCCCACCTCCATCAGGACGTTATTCGGGTTACTCACCCACTGGAAATGCCTTCAATGTGAAATCCGAGCCGTCTTCGTCGTCTTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCGGTCATTTCGGTCATGGAATGTCCTCAGATTCTAGTGGATTTAGTCACGATATTAGCAGAATGCCCGATAATCCGCCAAGAAATAGGGGACACAGGCGTGCTCATTCAGAGATTCTAACTCTACCTGATGATATCAGCTTCGACAGTGACCTTGGTGTTGTTGGAGGCGCAGATGGGCCGTCGTTTTCTGATGACACAGAGGAGGACTTACTCTCTATGTACCTTGATATGGATAAATTCAATTCGTCATCTGCTACATCGGCATTTCAATTGGGTGAGCCGTCTAATGCTGCTGCAGCTTCAGGTTCGGCACCCACGTCAGCTCCTGCATCAGGAGGGCCTGCCTCTTCTGCGGAGAACAATGTTGTTGGTAATAATGAACGGCCTAGAGTTAGACACCAACACAGCCAATCCATGGATGGGTCCACAACCATCAAACCTGAGATGCTAGTCTCTGGTTCAGATGACATATCTGCGGCTGATTCTAAAAAAGCAATGTCAGCTGCCAAGCTTGCTGAACTTGCTTTAATTGATCCCAAGCGTGCAAAGAGGATTTGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGAAAGATGCGCTACATTGCTGAACTTGAAAGGAAGGTGCAGACATTGCAAACCGAAGCAACATCTTTGTCTGCACAGTTAACCCTATTGCAGAGAGATACCAATGGACTTAATTCGGAGAACAATGAGCTGAAGTTGCGATTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAAGAAATTCAGCATTTGAAAATACTGACTGGTCAAGCTATGCCACCTAATAATGGAGGGCCTATGATGAACTTTTCTTCTTTTGGAGGGGGGCAGCAATTCTATCCGAATAATAATCACGCGATGCACACACTTCTAGCTGCACAACAGTTCCAACAGCTCCAGATTCATCCTCAGAAGCAGCAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAACAGATGTTGCAACAACAGCAGGAACAGATGCATCAACAGTCAGGAGAGTTGAAAATGAGGTCATCTACACCTTCTCCCGGCCCTAAAGATAATGCATCATCGGACGTAAATCCTTCAATGGGCAAGGATTGTTGA 1299 0.4634 MEKDKPLVHGGGLPPPSGRYSGYSPTGNAFNVKSEPSSSSSYPPMVPGSSPDSGHFGHGMSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAFQLGEPSNAAAASGSAPTSAPASGGPASSAENNVVGNNERPRVRHQHSQSMDGSTTIKPEMLVSGSDDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNNGGPMMNFSSFGGGQQFYPNNNHAMHTLLAAQQFQQLQIHPQKQQQQHQFQQLQQQMLQQQQEQMHQQSGELKMRSSTPSPGPKDNASSDVNPSMGKDC 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 21 47 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 149 177 - -
Stsc90673g00019 432 SUPERFAMILY Leucine zipper domain 233 287 IPR046347 GO:0003700|GO:0006355
Stsc90673g00019 432 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 75 92 - -
Stsc90673g00019 432 Pfam bZIP transcription factor 233 291 IPR004827 GO:0003700|GO:0006355
Stsc90673g00019 432 FunFam probable transcription factor PosF21 232 285 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 55 71 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 381 432 - -
Stsc90673g00019 432 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Stsc90673g00019 432 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 38 402 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 1 119 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 149 201 - -
Stsc90673g00019 432 Coils Coil 249 318 - -
Stsc90673g00019 432 Coils Coil 376 396 - -
Stsc90673g00019 432 MobiDBLite consensus disorder prediction 381 426 - -
Stsc90673g00019 432 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
Stsc90673g00019 432 Gene3D - 232 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90673g00019 Stsc-Chr90673 74968 78048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90673g00019 19 364 bZIP Transcription Factor Family AT1G06070 72.832 2.10e-169 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc90673g00019 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90673g00019 - - gmx:100786738 561.992