Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90672g00005 ATGAGCGAGTCCAACCATAATACTACTGAAGCAAATACCACAAGCTCTGACCAATTTGTCAAAGAGATGAGACAGCAGGAGGAGCCTACTATCTTACACTTTTCTGAAGATGAGGAAGATCTTGTTGCTAGGATGTTTAGATTGGTTGGCAAGAGGTGGTCTCTTATTGCTGGGAGAATCCCTGGAAGAACAGCACAAGAGGTTGAAAAGTATTGGACTTCAAAGTGCGCATTTCCCAGTGACCAATGCTCTTCCTCTGCATAA 264 0.4356 MSESNHNTTEANTTSSDQFVKEMRQQEEPTILHFSEDEEDLVARMFRLVGKRWSLIAGRIPGRTAQEVEKYWTSKCAFPSDQCSSSA 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90672g00005 87 Gene3D - 33 76 - -
Stsc90672g00005 87 FunFam MYB-like transcription factor 33 75 - -
Stsc90672g00005 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 33 75 - -
Stsc90672g00005 87 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 80 IPR017930 -
Stsc90672g00005 87 Pfam Myb-like DNA-binding domain 34 72 IPR001005 -
Stsc90672g00005 87 SUPERFAMILY Homeodomain-like 34 74 IPR009057 -
Stsc90672g00005 87 ProSiteProfiles Myb-like domain profile. 34 76 IPR001005 -
Stsc90672g00005 87 SMART sant 30 78 IPR001005 -
Stsc90672g00005 87 CDD SANT 34 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90672g00005 Stsc-Chr90672 40561 41921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90672g00005 33 77 MYB Transcription Factor Family AT5G14750 51.111 1.61e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc90672g00005 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90672g00005 - - adu:107482590 162.925