Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90671g00023 | ATGAGACTTACCTCTAACATTCTCCATTTGTGGTGGAGTGTCTCATCCTTTGTTCTTCTTCTTTTTCTTGCTCTGCTTCAATCATCAGTAGTACTTGCTCTTAACTCTGATGGGATTCTCTTGCTTCACTTCAAGTACTCTATCCTCAGTGACCCTTTATCAGTCTTAGATACATGGAACTACGATGATGTAACTCCATGTTCATGGAATGGAATCACATGTACAGAAATTGGAACACCAGATACCCCAGATTTTCTGAGAGTCACAAGCTTGAACCTTCCCCATAGCCAGCTTCTTGGTTCCATTGCTGAAGAACTAGGCATGATTGAACACCTTCGCCACCTTGATCTCTCCCACAACCTCCTCAATGGTTCCCTGCCAGATTCCATCTTCAACTCTTCACAGCTTCAAGTTCTTTCCCTCTCAAACAATGTCATCTCAGGAGAGTTACCAGAGCTCATTGGCAAATTAACAAGCCTTCAAGTTCTCAATCTCTCTGACAATGCCTTTGGTGGTTCAATCCCAGAAACCATCACCTCTTTGCAGAACCTAACCACCGTTTCACTCAAGAATAACTACTTCTCAGGAGGGGTCCCAAGCGGTTTCAACTTCACCCAGGTTTTGGATCTGTCATCAAATCTTCTCAACGGTTCTCTGCCAAATGAGTTTGGTGGGGAAAACTTGAGGTACTTGAACCTCTCTTACAACAAGGTTTCAGGGACAATTCCACAAACATTTGCAAGGCATATTCCTGGAAACGCCACAATTGATCTCTCCTTCAACAACCTCACAGGTCCAATACCAGATTCTTCAGCTTTACTCAACCAGAAAGCCGAATCTCTCTCTGGAAATGCTGATCTATGCGGGAAGCCTCTCAAGATTCTGTGTTCCATTCCTTCTACACTCTCTGATCCTCCAACCAATGCAACTACTACATCTTCTCCTGCAATTGCAGCCATACCAAAAACAATTGACACAACACCACCAACAAACGCAACAGGAGGAAGCAACACCGGTTCTCAGAACGTGTCACCGAGTGGCATGAAACCTGCAACCATAGCCGCCATTGTTGTTGGAGACTTAGCCGGCATGGCTGTTCTAGCATTGATCATTCTCTTCGTCTACCAAAAGAGAAAGAATAAAAGGGATCCAAATGAAACCAAGAACAACAGCGAAAACAAAAAAGACGAAACCATCACAAAACAAAACCATAACCACGACGCGAAAAAAACATCATCATCGCTCCCATGCTCATCATTATGCCTAACAATGAAAGAAGAATCGACCTCATCAGAAGAAGCATCATCAGCAAGCTCCGAGAGCGAGCAGGAGAACGCAGAAAACGGTAAGGTTCCGAAAGGAGGGAGTCTTGTGACGGTGGACGGAGAGACCAAGCTGGATTTGGAGAGCCTCCTGAAGGCATCGGCGTATATATTGGGAAGCAGTGGGGGCAGCATAGTGTACAAGGCGGTTCTAGAAGATGGTAGAATCTTCGCCGTACGGAGGATCGGTGAGTGTGGAATTGAGAGGATGAAGGACTTCGAGAACCAAGTCAGAGCCGTTGCCAAGATTCGTCATCCCAATTTGGTTAGGCTTCGCGCCTTCAGCTGGGCTCAAGACGAGAAGCTTCTAATCTCCGATTACGTTTCTAATACCACCCTCGCATCCATCGGTCCAAGGAGAGGTGGTGGTTCATCGTCACCCTTCAACTTGGGGTTCGAAATTCGGTTAAAGATAGCAAAAGGAGTTGCACGAGGCTTGGCATTCATTCACGAGAAGAAACACGTGCATGGCAATATTAAACCCACCAACATCTTGTTAAATTCCGAGATGGAACCTGTTATCTGTGATTTTGGGCTAGACCGGCTCATCTTCAACAACGATAACATTAACCACAGAGCAAACGGTTCGGCTAGGAACTTGATGCAACAACAACAAGAGAGTGCGACCATTGGTTCAAGTCCTTATTCTGCTGCAACGACAACAATGCTTGGAACATCATCATCCATTATTGGGACCCCAGTGGCGTATCAAGCACCAGAGTCACTTCAAAACATTAGGCCAAACCCCAAGTGGGACGTGTACTCGTTTGGGATGGTTCTACTTGAGCTTCTAAGTGGGAGGGTAATTTCAGACCGGGAGTTAGAGCAGTGGTTTGGAGTTGGACCGGGTTCGGTGGAAGAGGAGAAGAACCGGGTGTTGATGAGGATGGCCGACGTGGCAATCAAGTCTGACGTGGCAGGAAGAGAGAGTGCCATCTTGACTTGCTTCAAGTTGGGGCTGAGTTGTACCTCAGTTGCCCCACATAAGAGACCCTCAATGAAAGAGGCTCTGCATATCTTGGACAAGATCCCTTCATCTGCCACAAATTAA | 2373 | 0.4627 | MRLTSNILHLWWSVSSFVLLLFLALLQSSVVLALNSDGILLLHFKYSILSDPLSVLDTWNYDDVTPCSWNGITCTEIGTPDTPDFLRVTSLNLPHSQLLGSIAEELGMIEHLRHLDLSHNLLNGSLPDSIFNSSQLQVLSLSNNVISGELPELIGKLTSLQVLNLSDNAFGGSIPETITSLQNLTTVSLKNNYFSGGVPSGFNFTQVLDLSSNLLNGSLPNEFGGENLRYLNLSYNKVSGTIPQTFARHIPGNATIDLSFNNLTGPIPDSSALLNQKAESLSGNADLCGKPLKILCSIPSTLSDPPTNATTTSSPAIAAIPKTIDTTPPTNATGGSNTGSQNVSPSGMKPATIAAIVVGDLAGMAVLALIILFVYQKRKNKRDPNETKNNSENKKDETITKQNHNHDAKKTSSSLPCSSLCLTMKEESTSSEEASSASSESEQENAENGKVPKGGSLVTVDGETKLDLESLLKASAYILGSSGGSIVYKAVLEDGRIFAVRRIGECGIERMKDFENQVRAVAKIRHPNLVRLRAFSWAQDEKLLISDYVSNTTLASIGPRRGGGSSSPFNLGFEIRLKIAKGVARGLAFIHEKKHVHGNIKPTNILLNSEMEPVICDFGLDRLIFNNDNINHRANGSARNLMQQQQESATIGSSPYSAATTTMLGTSSSIIGTPVAYQAPESLQNIRPNPKWDVYSFGMVLLELLSGRVISDRELEQWFGVGPGSVEEEKNRVLMRMADVAIKSDVAGRESAILTCFKLGLSCTSVAPHKRPSMKEALHILDKIPSSATN | 790 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90671g00023 | 790 | MobiDBLite | consensus disorder prediction | 380 | 456 | - | - | |
Stsc90671g00023 | 790 | FunFam | Leucine-rich repeat receptor-like protein kinase | 204 | 298 | - | - | |
Stsc90671g00023 | 790 | Pfam | Leucine Rich Repeat | 227 | 246 | IPR001611 | GO:0005515 | |
Stsc90671g00023 | 790 | Gene3D | Ribonuclease Inhibitor | 34 | 204 | IPR032675 | - | |
Stsc90671g00023 | 790 | Pfam | Leucine rich repeat | 111 | 169 | IPR001611 | GO:0005515 | |
Stsc90671g00023 | 790 | SMART | LRR_typ_2 | 109 | 133 | IPR003591 | - | |
Stsc90671g00023 | 790 | SMART | LRR_typ_2 | 157 | 181 | IPR003591 | - | |
Stsc90671g00023 | 790 | MobiDBLite | consensus disorder prediction | 380 | 408 | - | - | |
Stsc90671g00023 | 790 | ProSiteProfiles | Leucine-rich repeat profile. | 111 | 133 | IPR001611 | GO:0005515 | |
Stsc90671g00023 | 790 | Pfam | Leucine rich repeat N-terminal domain | 35 | 74 | IPR013210 | - | |
Stsc90671g00023 | 790 | ProSiteProfiles | Protein kinase domain profile. | 473 | 782 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90671g00023 | 790 | Gene3D | Phosphorylase Kinase; domain 1 | 442 | 548 | - | - | |
Stsc90671g00023 | 790 | FunFam | Leucine-rich repeat receptor-like protein kinase | 34 | 200 | - | - | |
Stsc90671g00023 | 790 | SUPERFAMILY | Protein kinase-like (PK-like) | 478 | 781 | IPR011009 | - | |
Stsc90671g00023 | 790 | SUPERFAMILY | L domain-like | 38 | 294 | - | - | |
Stsc90671g00023 | 790 | Gene3D | Ribonuclease Inhibitor | 205 | 298 | IPR032675 | - | |
Stsc90671g00023 | 790 | Pfam | Protein kinase domain | 479 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90671g00023 | 790 | CDD | TM_EGFR-like | 352 | 382 | - | - | |
Stsc90671g00023 | 790 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 790 | - | - | |
Stsc90671g00023 | 790 | MobiDBLite | consensus disorder prediction | 409 | 445 | - | - | |
Stsc90671g00023 | 790 | MobiDBLite | consensus disorder prediction | 303 | 347 | - | - | |
Stsc90671g00023 | 790 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 90 | 783 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90671g00023 | Stsc-Chr90671 | 130812 | 133868 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90671g00023 | 16 | 784 | Receptor kinase-like Gene Family | AT4G37250 | 48.143 | 0.0 | 684 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Stsc90671g00023 | Pkinase | 2.3e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90671g00023 | - | - | aip:107618064 | 1286.17 |