Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90671g00023 ATGAGACTTACCTCTAACATTCTCCATTTGTGGTGGAGTGTCTCATCCTTTGTTCTTCTTCTTTTTCTTGCTCTGCTTCAATCATCAGTAGTACTTGCTCTTAACTCTGATGGGATTCTCTTGCTTCACTTCAAGTACTCTATCCTCAGTGACCCTTTATCAGTCTTAGATACATGGAACTACGATGATGTAACTCCATGTTCATGGAATGGAATCACATGTACAGAAATTGGAACACCAGATACCCCAGATTTTCTGAGAGTCACAAGCTTGAACCTTCCCCATAGCCAGCTTCTTGGTTCCATTGCTGAAGAACTAGGCATGATTGAACACCTTCGCCACCTTGATCTCTCCCACAACCTCCTCAATGGTTCCCTGCCAGATTCCATCTTCAACTCTTCACAGCTTCAAGTTCTTTCCCTCTCAAACAATGTCATCTCAGGAGAGTTACCAGAGCTCATTGGCAAATTAACAAGCCTTCAAGTTCTCAATCTCTCTGACAATGCCTTTGGTGGTTCAATCCCAGAAACCATCACCTCTTTGCAGAACCTAACCACCGTTTCACTCAAGAATAACTACTTCTCAGGAGGGGTCCCAAGCGGTTTCAACTTCACCCAGGTTTTGGATCTGTCATCAAATCTTCTCAACGGTTCTCTGCCAAATGAGTTTGGTGGGGAAAACTTGAGGTACTTGAACCTCTCTTACAACAAGGTTTCAGGGACAATTCCACAAACATTTGCAAGGCATATTCCTGGAAACGCCACAATTGATCTCTCCTTCAACAACCTCACAGGTCCAATACCAGATTCTTCAGCTTTACTCAACCAGAAAGCCGAATCTCTCTCTGGAAATGCTGATCTATGCGGGAAGCCTCTCAAGATTCTGTGTTCCATTCCTTCTACACTCTCTGATCCTCCAACCAATGCAACTACTACATCTTCTCCTGCAATTGCAGCCATACCAAAAACAATTGACACAACACCACCAACAAACGCAACAGGAGGAAGCAACACCGGTTCTCAGAACGTGTCACCGAGTGGCATGAAACCTGCAACCATAGCCGCCATTGTTGTTGGAGACTTAGCCGGCATGGCTGTTCTAGCATTGATCATTCTCTTCGTCTACCAAAAGAGAAAGAATAAAAGGGATCCAAATGAAACCAAGAACAACAGCGAAAACAAAAAAGACGAAACCATCACAAAACAAAACCATAACCACGACGCGAAAAAAACATCATCATCGCTCCCATGCTCATCATTATGCCTAACAATGAAAGAAGAATCGACCTCATCAGAAGAAGCATCATCAGCAAGCTCCGAGAGCGAGCAGGAGAACGCAGAAAACGGTAAGGTTCCGAAAGGAGGGAGTCTTGTGACGGTGGACGGAGAGACCAAGCTGGATTTGGAGAGCCTCCTGAAGGCATCGGCGTATATATTGGGAAGCAGTGGGGGCAGCATAGTGTACAAGGCGGTTCTAGAAGATGGTAGAATCTTCGCCGTACGGAGGATCGGTGAGTGTGGAATTGAGAGGATGAAGGACTTCGAGAACCAAGTCAGAGCCGTTGCCAAGATTCGTCATCCCAATTTGGTTAGGCTTCGCGCCTTCAGCTGGGCTCAAGACGAGAAGCTTCTAATCTCCGATTACGTTTCTAATACCACCCTCGCATCCATCGGTCCAAGGAGAGGTGGTGGTTCATCGTCACCCTTCAACTTGGGGTTCGAAATTCGGTTAAAGATAGCAAAAGGAGTTGCACGAGGCTTGGCATTCATTCACGAGAAGAAACACGTGCATGGCAATATTAAACCCACCAACATCTTGTTAAATTCCGAGATGGAACCTGTTATCTGTGATTTTGGGCTAGACCGGCTCATCTTCAACAACGATAACATTAACCACAGAGCAAACGGTTCGGCTAGGAACTTGATGCAACAACAACAAGAGAGTGCGACCATTGGTTCAAGTCCTTATTCTGCTGCAACGACAACAATGCTTGGAACATCATCATCCATTATTGGGACCCCAGTGGCGTATCAAGCACCAGAGTCACTTCAAAACATTAGGCCAAACCCCAAGTGGGACGTGTACTCGTTTGGGATGGTTCTACTTGAGCTTCTAAGTGGGAGGGTAATTTCAGACCGGGAGTTAGAGCAGTGGTTTGGAGTTGGACCGGGTTCGGTGGAAGAGGAGAAGAACCGGGTGTTGATGAGGATGGCCGACGTGGCAATCAAGTCTGACGTGGCAGGAAGAGAGAGTGCCATCTTGACTTGCTTCAAGTTGGGGCTGAGTTGTACCTCAGTTGCCCCACATAAGAGACCCTCAATGAAAGAGGCTCTGCATATCTTGGACAAGATCCCTTCATCTGCCACAAATTAA 2373 0.4627 MRLTSNILHLWWSVSSFVLLLFLALLQSSVVLALNSDGILLLHFKYSILSDPLSVLDTWNYDDVTPCSWNGITCTEIGTPDTPDFLRVTSLNLPHSQLLGSIAEELGMIEHLRHLDLSHNLLNGSLPDSIFNSSQLQVLSLSNNVISGELPELIGKLTSLQVLNLSDNAFGGSIPETITSLQNLTTVSLKNNYFSGGVPSGFNFTQVLDLSSNLLNGSLPNEFGGENLRYLNLSYNKVSGTIPQTFARHIPGNATIDLSFNNLTGPIPDSSALLNQKAESLSGNADLCGKPLKILCSIPSTLSDPPTNATTTSSPAIAAIPKTIDTTPPTNATGGSNTGSQNVSPSGMKPATIAAIVVGDLAGMAVLALIILFVYQKRKNKRDPNETKNNSENKKDETITKQNHNHDAKKTSSSLPCSSLCLTMKEESTSSEEASSASSESEQENAENGKVPKGGSLVTVDGETKLDLESLLKASAYILGSSGGSIVYKAVLEDGRIFAVRRIGECGIERMKDFENQVRAVAKIRHPNLVRLRAFSWAQDEKLLISDYVSNTTLASIGPRRGGGSSSPFNLGFEIRLKIAKGVARGLAFIHEKKHVHGNIKPTNILLNSEMEPVICDFGLDRLIFNNDNINHRANGSARNLMQQQQESATIGSSPYSAATTTMLGTSSSIIGTPVAYQAPESLQNIRPNPKWDVYSFGMVLLELLSGRVISDRELEQWFGVGPGSVEEEKNRVLMRMADVAIKSDVAGRESAILTCFKLGLSCTSVAPHKRPSMKEALHILDKIPSSATN 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90671g00023 790 MobiDBLite consensus disorder prediction 380 456 - -
Stsc90671g00023 790 FunFam Leucine-rich repeat receptor-like protein kinase 204 298 - -
Stsc90671g00023 790 Pfam Leucine Rich Repeat 227 246 IPR001611 GO:0005515
Stsc90671g00023 790 Gene3D Ribonuclease Inhibitor 34 204 IPR032675 -
Stsc90671g00023 790 Pfam Leucine rich repeat 111 169 IPR001611 GO:0005515
Stsc90671g00023 790 SMART LRR_typ_2 109 133 IPR003591 -
Stsc90671g00023 790 SMART LRR_typ_2 157 181 IPR003591 -
Stsc90671g00023 790 MobiDBLite consensus disorder prediction 380 408 - -
Stsc90671g00023 790 ProSiteProfiles Leucine-rich repeat profile. 111 133 IPR001611 GO:0005515
Stsc90671g00023 790 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Stsc90671g00023 790 ProSiteProfiles Protein kinase domain profile. 473 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90671g00023 790 Gene3D Phosphorylase Kinase; domain 1 442 548 - -
Stsc90671g00023 790 FunFam Leucine-rich repeat receptor-like protein kinase 34 200 - -
Stsc90671g00023 790 SUPERFAMILY Protein kinase-like (PK-like) 478 781 IPR011009 -
Stsc90671g00023 790 SUPERFAMILY L domain-like 38 294 - -
Stsc90671g00023 790 Gene3D Ribonuclease Inhibitor 205 298 IPR032675 -
Stsc90671g00023 790 Pfam Protein kinase domain 479 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90671g00023 790 CDD TM_EGFR-like 352 382 - -
Stsc90671g00023 790 Gene3D Transferase(Phosphotransferase) domain 1 561 790 - -
Stsc90671g00023 790 MobiDBLite consensus disorder prediction 409 445 - -
Stsc90671g00023 790 MobiDBLite consensus disorder prediction 303 347 - -
Stsc90671g00023 790 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 90 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90671g00023 Stsc-Chr90671 130812 133868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90671g00023 16 784 Receptor kinase-like Gene Family AT4G37250 48.143 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc90671g00023 Pkinase 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90671g00023 - - aip:107618064 1286.17