Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90671g00020 ATGGCTGTAAGCTTGTGGACTATAAGAAGTATTGGGGCTCCATCAACTGGTGTAGCTGTTTCTGAGCTATCGCATGCATCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGGTTTAAGCTAGTTACTGACAATATAACAACCCGAAAGCCACGCCTTCTTCTATGGGTGATTGGATTTGTGACATTTTTTCTCAGTGCAGTTCTAGACAACCTTACCTCTACAATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCCCCATCAGAGTATCGAAAGATTCTTGGAGCCGTTGTTGTAATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGCTGTGGATACATGGTCAAATATCTACAGTGCAAACAATGAAGGGTTTGTTTGTGCCTTCAGCCATTTCTCTAGCTGTTCCATTGGCGCTCATGTCCCTGACCAGCGAAGTGAATGGGAGGGGACAGGACTCTCCAAATGTCCTGGCTTCCGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCGGTGGGTTTAGGAGCTTTGATTTTCGTCCCAGTGTTCAAGGCCCTCACTGGTTTGCCTCCATACATGGGGATGCTACTTGGACTCGGCGTGCTTTGGATCCTCACTGATGCTATTCATTATGGTGAATCTGAAAGACAAAGGCTAAAAGTGCCGCAGGCTCTGTCAAGAATAGACACTCAAGGAGCTCTATTCTTCCTGGGAATTCTATTGTCTGTTAGCAGCCTGGAGGCAGCAGGAATCCTTCGTGAAATAGCAAATTACCTTGATACTCATATCCCGAGCAGTGAACTGATTGCAAGTGCCATTGGGGTCATATCGGCAATAATTGACAATGTTCCATTGGTTGCTGCTGCGATGGGAATGTATGATCTCTCGTCTTTCCCCCAGGATTCTGAGTTCTGGCAACTGGTTGCATTCTGTGCCGGTACTGGTGGGTCAATGTTAGTTATTGGCTCGGCTGCCGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCTTTTGCGGGTTATGCTGCTGGTATTGCTGCTTATTTAGCATTACATAACCTCAACATATCCCTGCCTACAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1221 0.4603 MAVSLWTIRSIGAPSTGVAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSAVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAISLAVPLALMSLTSEVNGRGQDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDTHIPSSELIASAIGVISAIIDNVPLVAAAMGMYDLSSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISLPTTLAEVPFLSGS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90671g00020 406 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 406 IPR045016 GO:0006814|GO:0015297
Stsc90671g00020 406 Pfam Citrate transporter 30 337 IPR004680 GO:0016020|GO:0055085
Stsc90671g00020 406 NCBIfam sodium:proton antiporter NhaD 15 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90671g00020 Stsc-Chr90671 117151 120115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90671g00020 1 406 Antiporters AT3G19490 87.192 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90671g00020 - - cill:122309076 687.952