Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90671g00019 ATGGCCACGTTTTCCATTGGGGCACACACCCACTTGTCCATGTTCCACCATTTCCGGAACTCCACCCTTTCACTTCATCGCCTTCACTCTCTTGAACCCTCACCCTCCTCGTTCTGTAGAATCAAAGGGCCCAGCTTGCTCCGTAATCATGTCTTGGCGCGTGCAGAAGATAAGGCCAGAGGTTCCTCCACTTCTACCCAGCAGGAGTTCCAGGAGTTACCAACTGAATCTGGAACTTGTGATCCCCTGTGTTCGCTTGATGAAACAAGCTCACAAGATTTTGAGGACAATTACAAGCCCAAGACCGATTTGCTCAAAGCTGTTGCGGTATTTGCAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCAGAAAATCAGGCTCCATCAACTGGTGTAGCTGTTTCTGAGCTATCGCATGCATCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGGTTTAAGCTAGTTACTGACAATATAACAACCCGAAAGCCACGCCTTCTTCTATGGGTGATTGGATTTGTGACATTTTTTCTCAGTGCAGTTCTAGACAACCTTACCTCTACAATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCCCCATCAGAGTATCGAAAGATTCTTGGAGCCGTTGTTGTAATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGCTGTGGATACATGGTCAAATATCTACAGTGCAAACAATGAAGGGTTTGTTTGTGCCTTCAGCCATTTCTCTAGCTGTTCCATTGGCGCTCATGTCCCTGACCAGCGAAGTGAATGGGAGGGGACAGGACTCTCCAAATGTCCTGGCTTCCGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCGGTGGGTTTAGGAGCTTTGATTTTCGTCCCAGTGTTCAAGGCCCTCACTGGTTTGCCTCCATACATGGGGATGCTACTTGGACTCGGCGTGCTTTGGATCCTCACTGATGCTATTCATTATGGTGAATCTGAAAGACAAAGGCTAAAAGTGCCGCAGGCTCTGTCAAGAATAGACACTCAAGGAGCTCTATTCTTCCTGGGAATTCTATTGTCTGTTAGCAGCCTGGAGGCAGCAGGAATCCTTCGTGAAATAGCAAATTACCTTGATACTCATATCCCGAGCAGTGAACTGATTGCAAGTGCCATTGGGGTCATATCGGCAATAATTGACAATGTTCCATTGGTTGCTGCTGCGATGGGAATGTATGATCTCTCGTCTTTCCCCCAGGATTCTGAGTTCTGGCAACTGGTTGCATTCTGTGCCGGTACTGGTGGGTCAATGTTAGTTATTGGCTCGGCTGCCGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCTTTTGCGGGTTATGCTGCTGGTATTGCTGCTTATTTAGCATTACATAACCTCAACATATCCCTGCCTACAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1575 0.4717 MATFSIGAHTHLSMFHHFRNSTLSLHRLHSLEPSPSSFCRIKGPSLLRNHVLARAEDKARGSSTSTQQEFQELPTESGTCDPLCSLDETSSQDFEDNYKPKTDLLKAVAVFAAAATGAVAINHSWVAENQAPSTGVAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSAVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAISLAVPLALMSLTSEVNGRGQDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDTHIPSSELIASAIGVISAIIDNVPLVAAAMGMYDLSSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISLPTTLAEVPFLSGS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90671g00019 524 Pfam Citrate transporter 121 455 IPR004680 GO:0016020|GO:0055085
Stsc90671g00019 524 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 130 524 IPR045016 GO:0006814|GO:0015297
Stsc90671g00019 524 MobiDBLite consensus disorder prediction 59 75 - -
Stsc90671g00019 524 MobiDBLite consensus disorder prediction 56 78 - -
Stsc90671g00019 524 NCBIfam sodium:proton antiporter NhaD 115 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90671g00019 Stsc-Chr90671 115577 119934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90671g00019 1 524 Antiporters AT3G19490 70.588 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90671g00019 - - gmx:100779521 789.645