Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90671g00004 ATGGAATCGGTACCTGCTGATGTATCAAATATACCTCCTATTAAAGACCCGTCTCCTTCACCTCCAGTCAAAGACACTGATGGACAAGCTTCTTCGGCTCCTGTAACCTTTCGGCAAGATAGTTCTGCACATGTGGTACCAACTAAGCCATCTTCGACTGGGGTATCATCTTGGGCGAAAAACTTGAATATTTCTCAGCCATCTGGCTCACAAGAGGACCCATCAACTGCAAATGCTGGGAAATCAACTTTTGCCCGCTTAACCAGTAATTTGGGATTGCGCTTATCACCCAAGTCTCCTCCATCAGATGACAGTTCTGATGAGACACCAGTACAATCTAATAATATTTTTGGAAGTATTACAAGAGGTTTGGTTGACTCTTCCAAGAATGCTGTGAAAGCTGTGCAGGTTAAGGCACGACATGTAGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGCTTTGATTTAGATATGACATATATCACAGAAAACATCATTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGCTATGTTGAAGGATTTTACAGAAATCACATGGAAGAAGTGATTAAGTTTTTTGAGACTCACCATAAGGATAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCACCACTTCAACTGGTTATCTCATTTTGTCATAGTGCATACTCATGGTTGAAATTAGATATCGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGAACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTAAAGTTCTTTCCAACTGCTGAGGAGTCAATGGATTACTATAATCTGAAACGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTAGGTACGTCAAATATTTTGAACGTGTATTGACTTACTTCAATGGCGAAAACCCACCTGCCCGTAGATGCATGCTTAGGGGATTTCGGCTTCACAGGTGCCCTTACTGGATCAGGCCTTCAATAACTGTCTCAGACCATAGTGGTGTGTTGTTCTCTACCAAAAAGCATCCAAGGACCAAGGATCTTTTGCCAGAAGATTTCTGGTTCAGCGCTCCAAAGAAGGGAGTAATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAATTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGACTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGGAAAGTATTGACCACCAATGATCTTGATGGCTTTGACAAGAGGAAATTGCCTTCTCCAGGATTCTTGGTTGAGGTTGTGCTAGTCGATTATAATGGTAATGTTGTAGCTTCTGAACCTGAGACTACTGGAAAAAGATCCAATGAGAGTTCAAGTAATAGTCCCGCCCCAGTTGAAGCGAGCACACCTGCACAGAATACAGACAAAGACTCAGGGAGTCAAGATAAAGATGATGTGTTTTCAGATGGTGATTCGGAGCATTCTGCTTCGTCAAGAGGCAAGCAAGAAAAAACAGCTTCTGAACCGGATAAAAAGGCCACCAGTGGATCTGAAACTAACAAAATTTCAAATCAAATAGCAAATATAACAAATGCAACTGAACAAGTTTCATTGGGAAGTGCAAGCTCGAAACCAGTTCATGCTGGTCAAACAAAAAGTGAAAATGAAAGAACTGTGTCCGGTGTTGAGATGGCCAGCTCAGAGAGTGAGTTTAAGGCCATGGCTGCAGATGCATCTGTTTTTACCTTTGGAGATGAAGAAGACTACGAAAGTGATTAA 1848 0.4205 MESVPADVSNIPPIKDPSPSPPVKDTDGQASSAPVTFRQDSSAHVVPTKPSSTGVSSWAKNLNISQPSGSQEDPSTANAGKSTFARLTSNLGLRLSPKSPPSDDSSDETPVQSNNIFGSITRGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNLKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLTTNDLDGFDKRKLPSPGFLVEVVLVDYNGNVVASEPETTGKRSNESSSNSPAPVEASTPAQNTDKDSGSQDKDDVFSDGDSEHSASSRGKQEKTASEPDKKATSGSETNKISNQIANITNATEQVSLGSASSKPVHAGQTKSENERTVSGVEMASSESEFKAMAADASVFTFGDEEDYESD 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90671g00004 615 CDD PTP_PTEN 158 322 IPR045101 GO:0016791
Stsc90671g00004 615 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 161 329 IPR029021 -
Stsc90671g00004 615 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 125 583 - -
Stsc90671g00004 615 ProSiteProfiles C2 tensin-type domain profile. 334 461 IPR014020 -
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 468 499 - -
Stsc90671g00004 615 ProSiteProfiles Phosphatase tensin-type domain profile. 148 327 IPR029023 -
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 539 588 - -
Stsc90671g00004 615 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 262 301 IPR000387 GO:0016311|GO:0016791
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 468 592 - -
Stsc90671g00004 615 Gene3D Protein tyrosine phosphatase superfamily 133 330 IPR029021 -
Stsc90671g00004 615 SMART PTEN_C2_2 332 460 IPR014020 -
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 500 538 - -
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 1 114 - -
Stsc90671g00004 615 MobiDBLite consensus disorder prediction 24 114 - -
Stsc90671g00004 615 ProSitePatterns Tyrosine specific protein phosphatases active site. 264 274 IPR016130 GO:0016311|GO:0016791
Stsc90671g00004 615 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 133 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90671g00004 Stsc-Chr90671 24856 29822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90671g00004 40 615 Protein tyrosine phosphatase (PTP) family AT3G19420 68.654 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90671g00004 K01110 - gmx:100784003 996.112