Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90668g00011 ATGAAAGAAGAAGATGAACACGTGTTATTGCAAAGCATGGCCTGGTGTTTTGGGTTTCTAGTTTTGTATATTCTGGCAAAACTTGTGCATATCATATGGTGGAAACCAAAAAGTACAGAGAAGTTTCTGAGGAAGGAAGGGATTAAAGGAACTTCTTACAAAGCTATTAAAGGAGACATTCCAGATATGAATAAGTGTGGCCGTGAAGCATCATCAAAGCCTATCAATCTCAACCACCAAATCGTCCCTCGAGTCATCCCTTTCTTTCACAAAATGGTTCAGCAATACGGAGAAGTTTCAGTAAGCTGGTTTGGAAGAAAACCAAGAGTAACAATAGTAGATGCTGAACTTACTCGGTTGATTTTATCAAACAAGAGCGGTCAGATTATTAAGCCACCGCGTGAACCCTATGTTAAGCTTCTAACCAAGGGATTAACATCCCTCGAAGGTGAAAATTGGTCCCAACGAAGAAAAGCCGTTACATCTGCATTCCTCCTTGACAAGTTGAAGGGAATGCTTCCTGCATTTTCGTCTAGTTGTTGTACCATGATTGAGAGGTGGAAAAAGCTGGTGGAACAAAAGAATGGAGGATCGTGTGAATTGGATGTGACTTGTGAATTTGACATTCTCACGGGTGATGTTATTTCTCGAGCAGGATTTGGTAGCAGTTACAAAGAAGGAAAGAAAATCTTCGACCTTCAAAAGGAGATGGCAATCTTGGTGCATGATGCTCTCTCCAACATCTACATCCCTGGTTTCAGATTTATACCAACAAAGAAGAATAAGAAAAGGTACGACTTAGACGTTCAGATCAAAGGTATATTGATGGATATGATTCGGAAGAAAGAGCACGCAATGAAAGTTGATGGCAGTAGTAGTGATTTGTTAAGCATTCTACTAGAATCTAGAGAACAGCGTAATTCTCTGACAACCAACGACGTGATTGAGGATTGCAAATTGTTCTACTTTGCTGGCCAAGTCACCACAAAGAACCTGCTTGTGTGGACTATGGTGGTTTTGTCCATACACCCTGATTGGCAAGAAAAAGCAAGACAAGAAGTTTTAGACATTTTTGGCACAAAAGAAATACCGCCAGATTTTGAAGCCATAAACCGCCTCAAGATTGTGTCGATGATATTGTTGGAAGTTTTGCGACTATATCCACCTATACCATTAATTTCTCGGTACACAAGGTGTGAAACGAAGGTAGGAAGCATGAGGATTCCAGCAGGGGTGGAGCTTGTTTTACCATTGTTGCTTCTCCATCATGATGGAAGATATTGGGAGAATCCACAAGAGTTCAATCCAGAAAGGTTTACACAAGGGGTTTCAAAAGCTTCTAAGGATCAAAATGCTTTCTTTCCATTCGGTTGGGGCCCAAGAATCTGCCCTGGCCAGAACTTTGCCCACTTGGAATCAAAGATGGCTCTGGCTATGATTCTTCAACATTTCTCATTCCATCTTTCACCATATTATACTCATGCTCCATGTATGCGTCTCACTCTTTCGCCACAACATGGGGCTCCCGTTATTATTCAACGCATTTCATCAATTTAG 1557 0.411 MKEEDEHVLLQSMAWCFGFLVLYILAKLVHIIWWKPKSTEKFLRKEGIKGTSYKAIKGDIPDMNKCGREASSKPINLNHQIVPRVIPFFHKMVQQYGEVSVSWFGRKPRVTIVDAELTRLILSNKSGQIIKPPREPYVKLLTKGLTSLEGENWSQRRKAVTSAFLLDKLKGMLPAFSSSCCTMIERWKKLVEQKNGGSCELDVTCEFDILTGDVISRAGFGSSYKEGKKIFDLQKEMAILVHDALSNIYIPGFRFIPTKKNKKRYDLDVQIKGILMDMIRKKEHAMKVDGSSSDLLSILLESREQRNSLTTNDVIEDCKLFYFAGQVTTKNLLVWTMVVLSIHPDWQEKARQEVLDIFGTKEIPPDFEAINRLKIVSMILLEVLRLYPPIPLISRYTRCETKVGSMRIPAGVELVLPLLLLHHDGRYWENPQEFNPERFTQGVSKASKDQNAFFPFGWGPRICPGQNFAHLESKMALAMILQHFSFHLSPYYTHAPCMRLTLSPQHGAPVIIQRISSI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90668g00011 518 Pfam Cytochrome P450 88 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Stsc90668g00011 518 Gene3D Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90668g00011 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 508 - -
Stsc90668g00011 518 SUPERFAMILY Cytochrome P450 79 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90668g00011 Stsc-Chr90668 76207 78683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90668g00011 20 515 Cytochrome P450 AT3G14690 45.509 2.03e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90668g00011 - - aip:107623710 874.389