Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90668g00007 ATGTACAGGAAAAGAATGGAAAGAACACAAGACTACCTAAGGTACTGCCTCCAAGTTGCACAGGAAAAAGGAATCTTAGACCTCATTGTCCAAAACAAAGACGAATTTCAGCAAGCTATCAACTCCACTGTTCCTCCCATCCCCCCAACTCCAACCCCCATTCCTCCTCCTCACCACCCCAATCTTGCCGCCATCATTCATCAAGCCAAAATTGCTGGCTGGTATATTCATCCGACCGAGATTCAGTTGGGCGAGAAAATAGGGCAAGGAACCACGGCAGAGATTCATAGAGGAACATGGCGGGGATGCGAGGTGGCAGTGAAGTGCATAACAGCGGAGTTCTTCAACACAAATGCAAACGGCGTCGCATTCTTCGCTCAGGAAGTAGAAACCCTATCAAAGCAGCGCAACCGTTTCGTGCTCCACCTAATGGGCGCATGCCTTGACCCACCTCATCACGCCTGGCTCGTCACAGAGTATCTCAGCACCACCCTCAAGGACTGGCTGCACGGCTCCGGCAATAACCGGAAGAAGGGAAGAACCGTCCCACTTCCTCCGTTGAAAGAGAGAGTAACCAAAGCATTGGAGATCGCACAGGGCATGCAGTATCTCCATGAGCAGAAGCCAAAGCTCCTTCACCGTGACTTGAAGCCCAGCAACATTTTCTTGGACGATGGCATGCATGTTCGTGTTGCTGATTTCGGCCATGCTCGATTCTTGGATGATCATGAAATGGCTCTCACTGGAGAAACAGGAACATACGTTTATATGGCTCCTGAAGTGATCAAATGTGAGCCTTACAATGAAAAATGTGATGTATACAGTTTTGGTGTCATACTCAACGAGCTTCTTACAGGAAAATATCCCTTCCTTGAGACAGATTTTGGTCCTGCTAAGATTGCAATGGAAGTTGTGGAGAGTAAGATGAGGCCAATGCTTGCATCAGGTGAAGATGGGGAAGTGATTGATCTTGTATGTAGTTGCTGGGATGGGAATCCATCTAAAAGACCATCCTTCGCAACAATTACAAGCGCGCTCAAAACCTATGTCAACCGACTTCATTCTTCAAGTTGA 1074 0.4786 MYRKRMERTQDYLRYCLQVAQEKGILDLIVQNKDEFQQAINSTVPPIPPTPTPIPPPHHPNLAAIIHQAKIAGWYIHPTEIQLGEKIGQGTTAEIHRGTWRGCEVAVKCITAEFFNTNANGVAFFAQEVETLSKQRNRFVLHLMGACLDPPHHAWLVTEYLSTTLKDWLHGSGNNRKKGRTVPLPPLKERVTKALEIAQGMQYLHEQKPKLLHRDLKPSNIFLDDGMHVRVADFGHARFLDDHEMALTGETGTYVYMAPEVIKCEPYNEKCDVYSFGVILNELLTGKYPFLETDFGPAKIAMEVVESKMRPMLASGEDGEVIDLVCSCWDGNPSKRPSFATITSALKTYVNRLHSSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90668g00007 357 ProSiteProfiles Protein kinase domain profile. 81 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90668g00007 357 Pfam Protein kinase domain 83 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90668g00007 357 SUPERFAMILY Protein kinase-like (PK-like) 52 344 IPR011009 -
Stsc90668g00007 357 SMART serkin_6 81 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90668g00007 357 CDD STKc_MAP3K-like 87 346 - -
Stsc90668g00007 357 Gene3D Transferase(Phosphotransferase) domain 1 183 357 - -
Stsc90668g00007 357 ProSitePatterns Protein kinases ATP-binding region signature. 87 108 IPR017441 GO:0005524
Stsc90668g00007 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Stsc90668g00007 357 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
Stsc90668g00007 357 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90668g00007 Stsc-Chr90668 53941 55773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90668g00007 74 354 MAP Kinase Kinase Kinase AT2G17700 34.752 1.68e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Stsc90668g00007 Pkinase 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90668g00007 - - ahf:112717789 615.535