Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90668g00001 ATGGCTAGAATCGCTAACAGAGGGGATCCAAATAAGCACACTACTGATGGAATCGAAGAATCTTCTGACACTGGTGCTGAAATAATAGGAAAACAAGAATTCCTTGCTGCAGTCAGAAAAACAAGATCAACCAGAATCAAGAAGGGTAAGAAGAAAAGAACAAAGAAAGTACCAAATACCAGGTATCTTGGATGGGGAAACTTTGAAGTGAGGCTTAACACACCTACACTCTGTAGTGACAGACTTTATTTACCAAGGGATTTTGCTAGAGATATTAAGAAGATTGGTGGGAGTCGAAAATGGATAGTTGTAGGACCTAAGAACAACATAAAGACTCACTTTCAGTTCAAACTTATCAAAAGCAAGAATCATGGTAAAGAGTATAAGCTTGGATTGGGCTGGGAAAACTTTGGTGATGTTTATGAGCTAGAAGAGGATGACATATGCACTTTTCAGATTGCATCAGCAAAAAACCATCTCATTACAGCAAGTCTTAGATAG 501 0.3832 MARIANRGDPNKHTTDGIEESSDTGAEIIGKQEFLAAVRKTRSTRIKKGKKKRTKKVPNTRYLGWGNFEVRLNTPTLCSDRLYLPRDFARDIKKIGGSRKWIVVGPKNNIKTHFQFKLIKSKNHGKEYKLGLGWENFGDVYELEEDDICTFQIASAKNHLITASLR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90668g00001 166 CDD B3_DNA 79 151 IPR003340 GO:0003677
Stsc90668g00001 166 Pfam B3 DNA binding domain 73 155 IPR003340 GO:0003677
Stsc90668g00001 166 ProSiteProfiles B3 DNA-binding domain profile. 67 166 IPR003340 GO:0003677
Stsc90668g00001 166 MobiDBLite consensus disorder prediction 1 25 - -
Stsc90668g00001 166 SUPERFAMILY DNA-binding pseudobarrel domain 79 160 IPR015300 -
Stsc90668g00001 166 Gene3D - 64 163 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc90668g00001 B3 1.1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90668g00001 - K15156 aly:9329448 35.4242