Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90666g00012 ATGAGCACAAAAATGACCAGAAAGCCAAACGCAAGAAAACAGCACCATCATGTTGTATTGATCGATCTTCTTATTCTCTATTATTTTGTCTTCTTCTTCTTCTTCCCTGCCATAACCACAAAATCCGAAGCTAGTTGCAGTTCTGGCTGCGACCTTGCACTAGCTTCCTATTACCTATGGCCAGGAACAAACCTCACTTACATCTCCACCATCTTCGCAAAACCACAATCAGAGATTCTCAAATACAACCCTGGAATCAAAAACCCTGACTCCCTTCAGGATCAAAAAAGAATCAACGTTCCCTTCTCATGCGATTGCTTGAACAGTGATTTCTTAGGTCACACTTTTTCATACAAAACACAACACGGTGACACGTACAATAACATTGCTAAGCATGATTTCTCAAACCTCACAACTGAGGAGTGGGTGAGTAGGGTTAATAGCTATCCAGCTCTGCACATACCTGATGATGTTCTCATCAATGTCACTGTAAATTGTTCATGTGGTGATAAGCATGTGTCCAAGGATTATGGATTGTTTGCTACGTATCCCCTAAGGTTCGGCGAGGATTTGAAGTCGGTGGCGGCCGAATCCGGCGTGCCGGCCGAGTTGCTACAGAGGTACAATCCAGGGTCTGATTTTGGTGCCGGGAATGGGATTGTTTTTGTGCCGGCCAAAGATGAAAATGGAAAGTTTCCGCCACTGAAGTTGGGAAGAAAGAAAGTGGTGGCTGAGGTATCCCTTCTCCCAGTCCCACCAGGTGCATCTCATGATCAATTTGCTCAACTCCAACATGGTGGTGGAAGCAGTTTGGGTAAGGCATCAGAATCTTCCACTACTGTGATTTCTCCAAGGTTGACTGGTATTACAGTGGACAAGTCAGTGGAGTTTTCATATGAAGAACTGGCCAAAGCTACTAATGGCTTTAGCATAGCTAACAAAATTGGTCAAGGTGGTTTTGGTTCTGTATACTATGCAGAGCTTAGAGATGAGAAAGCAGCTATTAAGAGAATGGATATGCAAGCATCAAAAGAATTCCTTGCTGAACTCAAGGTTCTGACACACGTCCATCACTTGAACTTGGTGCGTTTAATAGGATATTGTGTTGAAGGCTCATTATTTTTGGTTTATGAATACATTGAGAATGGCAATCTAAGTCAACATTTGCGTGTCTCAGGGAGGGATCCATTATCTTGGCCTATTAGAGTTCAAATTGCACTTGATTCAGCAAGAGGACTTGAATACATTCATGAGCATACAGTTCCTGTCTATATCCATAGAGATATTAAATCAGCAAACATTTTGATAGACAAGAACTTCCGCGCAAAGGTTGCAGATTTTGGGCTAACAAAATTGACTGAATACGGTAGCTCTTCATTACAAACACGTCTTGTTGGTACATTTGGCTATATGCCTCCAGAATATGCACAGTATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCCGGAAAGGAAGCTATTATCAAGACAAATGAGATTGTGACTGAATCAAAAGGGCTTGTTGCCTTGTTTGAAGAGGTTCTTAGTCAGCCAGATCCAAAGGAAGATCTCTCTAAATATGTTGACCCTAGACTTGGTGCCAACTACCCTGTTGACTCTGTATTTAAGATGTGTCAACTTGCAAGAGCTTGCACACATGAAAACCCTCAACTAAGGCCAAGCATGAGATCAATTGTGGTTGCATTAATGACACTTTCATCAGCAACTGAGGATTGGGATGTTGGATCTTTCTATGAAAATCAAGCTTTGGTGCATCTAATGTCTGGAAGGTAG 1824 0.4194 MSTKMTRKPNARKQHHHVVLIDLLILYYFVFFFFFPAITTKSEASCSSGCDLALASYYLWPGTNLTYISTIFAKPQSEILKYNPGIKNPDSLQDQKRINVPFSCDCLNSDFLGHTFSYKTQHGDTYNNIAKHDFSNLTTEEWVSRVNSYPALHIPDDVLINVTVNCSCGDKHVSKDYGLFATYPLRFGEDLKSVAAESGVPAELLQRYNPGSDFGAGNGIVFVPAKDENGKFPPLKLGRKKVVAEVSLLPVPPGASHDQFAQLQHGGGSSLGKASESSTTVISPRLTGITVDKSVEFSYEELAKATNGFSIANKIGQGGFGSVYYAELRDEKAAIKRMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRVSGRDPLSWPIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISGKEAIIKTNEIVTESKGLVALFEEVLSQPDPKEDLSKYVDPRLGANYPVDSVFKMCQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90666g00012 607 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90666g00012 607 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 30 593 IPR044812 GO:0019199|GO:0045087
Stsc90666g00012 607 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Stsc90666g00012 607 CDD STKc_IRAK 315 576 - -
Stsc90666g00012 607 FunFam LysM receptor kinase 2 288 379 - -
Stsc90666g00012 607 FunFam PTI1-like tyrosine-protein kinase 3 380 593 - -
Stsc90666g00012 607 Gene3D Transferase(Phosphotransferase) domain 1 380 591 - -
Stsc90666g00012 607 Gene3D Phosphorylase Kinase; domain 1 294 379 - -
Stsc90666g00012 607 Pfam Protein tyrosine and serine/threonine kinase 311 578 IPR001245 GO:0004672|GO:0006468
Stsc90666g00012 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Stsc90666g00012 607 ProSiteProfiles Protein kinase domain profile. 309 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90666g00012 607 ProSitePatterns Protein kinases ATP-binding region signature. 315 336 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90666g00012 Stsc-Chr90666 126119 130290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90666g00012 21 607 Receptor kinase-like Gene Family AT3G21630 56.825 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc90666g00012 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90666g00012 - K13429 gmx:100802308 894.804