Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90666g00001 | ATGAGTCAACTCGGCGCTATTCTTCAGGAATCGCTGCGGACTCACACGGAGCCGAGGACCATTCTCGGATTGTTGACGGAGCAAATGGACGCTGCTTCCGCCTCCGCCGATGGAGCGCCTCGCACCAGGACCAGGCGCACCTTCAAGGACCGCTTAGGATTCATCGGCATAGGCTGTTGCGGTGCCACGTGGCGATTCCGTTCCGATTCCATAACGGTCAGGCACGAAGAACAAGAACAACAGCAGCTCCAGCAGCAACAACCACAGCAACAGCACCAACCGCTTCTTCTTGAAACGAATCCGCCTCGAGATCCGAACCGTTTTGGACCGGACTGCCTCTCTCCGACTCCGGCCAGTTCAGGTATGAACCTCGCGGCGGCGTTGGCGGCTGAGCGGCAGCTCCGGGGACCGCCACCGGAGGCGGAGGTACGTGAGACAAGAGGAAGGAGTAGTGTGCCAGGGACGCCGTGGAGAGTGTCCCTGATGAGGCTGCTGGAGGAAACAGACGGCGGCGATGCGGAGATTAGTGCGGCGGGGAAGGCATCGGAGGAAGAGAAGTTAAGTGTTGGTGGTGGAGGTGGAGGTGGTGTGGGGAATGATTGGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGCGCGGCGTTCATACCATGTGGTCACACTTTTTGCAGGGTTTGTTCAAGGGAGCTCTGGCTCAACCGAGGCTCTTGTCCCCTTTGCAATCGTTCCATTCTCGAGATTCTCGACATTTTCTGA | 756 | 0.5833 | MSQLGAILQESLRTHTEPRTILGLLTEQMDAASASADGAPRTRTRRTFKDRLGFIGIGCCGATWRFRSDSITVRHEEQEQQQLQQQQPQQQHQPLLLETNPPRDPNRFGPDCLSPTPASSGMNLAAALAAERQLRGPPPEAEVRETRGRSSVPGTPWRVSLMRLLEETDGGDAEISAAGKASEEEKLSVGGGGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF | 251 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90666g00001 | 251 | SMART | ring_2 | 203 | 240 | IPR001841 | - | |
Stsc90666g00001 | 251 | MobiDBLite | consensus disorder prediction | 73 | 120 | - | - | |
Stsc90666g00001 | 251 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 197 | 250 | IPR013083 | - | |
Stsc90666g00001 | 251 | PANTHER | OS01G0917900 PROTEIN | 5 | 251 | - | - | |
Stsc90666g00001 | 251 | MobiDBLite | consensus disorder prediction | 77 | 97 | - | - | |
Stsc90666g00001 | 251 | Pfam | Zinc finger, C3HC4 type (RING finger) | 202 | 245 | - | - | |
Stsc90666g00001 | 251 | SUPERFAMILY | RING/U-box | 199 | 248 | - | - | |
Stsc90666g00001 | 251 | ProSiteProfiles | Zinc finger RING-type profile. | 203 | 241 | IPR001841 | - | |
Stsc90666g00001 | 251 | MobiDBLite | consensus disorder prediction | 133 | 153 | - | - | |
Stsc90666g00001 | 251 | CDD | RING-HC | 203 | 240 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90666g00001 | Stsc-Chr90666 | 3617 | 4372 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90666g00001 | 29 | 251 | C3H Transcription Factor Family | AT4G22250 | 48.879 | 5.51e-57 | 179 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90666g00001 | - | - | pcin:129286609 | 258.84 |