Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90663g00030 ATGGCAGAAAGTCCAGTGTCCTTTCTACTGGACAAGCTGACTAGTTTGCTTCAAGAAGAAGTGAATCTCCAGAGAGGGGTTCGCGATGATGTTCAGCACATTAAAGGCGAATTGGAACGGCACAAGGCTATCTTAAGGGTGGCTGATGCACTTGAAGACAAAGACCATGAACTCCAAGTATGGATCAAACGAGTTAGAGATATTGCTCATGAAATGGAAGATGCTATAGATGAGTTCAATGTTCGCCTTGTTGATCAACATATGCATGGAAGGAACTCCTCTCTTACTCACAAGATTGTTTTCACATGGAAAACCTTGCAAGCTCGGCGCCAGATCGGTTCGCACATACAAGAGATCAAATCCAGATTGGATGTTATCTCCAGTGGGCGTCCCAGCATGCATGGGATAGGATCAAGGTCAAGTCAGAGGCTATCATCAAGGCTTGACAGCCAAGGCGATGCGCTTCTGCTAGAGGAGGCTGATCTTGTAGGCATTGAAACACCCAAGAAGCAGATAAGTGACTTGCTTTTCAAGGATGAAGCAAATAGGGATGTGATTGCCATTTATGGGATGGGAGGGTTGGGGAAAACTACATTGGCAAAGCAAGTCTATGATGATCCCAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGGTTATTGTTTCTCAATCTTTCAAGTTAGAAGAGCTCCTCAGAGACCTTGTTCAGCAGCTCTACAATGTCATTGGCAAACCAGCCCCTGAAGCTGTTGGACAAATGAGAAGTGACAAGCTCAAAGAGATGATCAAGAATTTGCTTCAGAGAAGCAGATACCTGATTGTGCTGGATGATGTATGGCATGTAAATGTCTGGGATTCTGTGAAATATGCTCTCCCCAACAATGGCCGTGGCAGCAGAGTTATGCTTACCACACGCAAGAGAAATGTGGCTATGTCTTCAAGTGCTGAGTTTGGTAAGGTATATAACCTTGAATTCTTGTCTGAGCATGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGGAACTCATGCCCTTCTCATCTAGAAGAAGTTTGCTGGAATATCTTGAAACTGTGTGGTGGCTTGCCACTAGCAATTGTAGCAATCAGTGGTGCTTTGGCCACAAGAGATAGGACAAACATAGAAGAATGGCAGATGGTTTGCAGAAGTTTCGGGGCTGAAATCGAAGGCAATGACAAGCTGGAGGACATGAAGAAAGTTCTTTCCCTTAGTTTCAATGAGTTACCTTACTACCTCAAATCCTGTTTGTTGTACTTGAGCATGTTCCCAGAATTTCATGCCATCGAGCACATGAGATTGATTCGTTTGTGGATAGCCGAAGGGTTCGTGGTTGGAGAAGATGGAAAGACACTGGAGGAAGTTGCAGACAGTTACCTCAAAGAGCTCTTGAACAGAAGTCTGCTACAAGTGGTTCAGAAAACCAGTGATGGCAGGATGAAGACTTGTAGAATGCATGACCTCATTAGGGAGATTGTCACTTTGAAATCAAAGAATCAGAACTTTGCAACCATTGCAAAAGAACAAGACATAACTTGGCCGGAGAAAGTTCGTCGCCTTTCAGTCATAAACACAATGCATAACATACAGCAAAACAAGACATTCCAACTTAGATCTCTGCTAATGTTTGCCTTATCAGATGCTAACCATGTTTTTTCCCTACATGCAGTGTTTTCCACTGGTTATAGGCTACTTAGAGTGTTAGATTTGCAGGATGCTCCATTGCAGGTTTTTCCTGATGAAGTTGTCAATCTTTACCTTCTAAAGTTCTTGAGTTTGAAGAACACAAAGGTGAAGAGCATTCCAGGCTCCATTAAGAAGCTGCAACACCTTGAGACATTGGACCTTAAACACACCAATGTCACAGAATTACCAGTTGAAATTGTGGAGCTGCAACGATTGCGCCATCTATTGGTGTACCGTTATGAGATTGAATCCTATGCTTACTTCCATTCCAAGTATGGATTCAAGGTGTCTGCCCCAATAGGACGTATGCTATCTTTGCAAAAGCTATGTTTTATAGAGGTAGACCAAGGAAGTAAGGCCTTGATGGTTGAGCTTGGAAAGCTTACACAACTTAGGAGGCTTGGAATAAGGAAGATGAGGCGAGAAGATGGGGCTGCTTTGTGTTCTTCGATTGAGAAGATGATCAATCTCAGATCATTGTCCATAACTGCAATCAATGAAGATGAGATCATTGACATTCACAACATTTCCAACCCTCCTCAGCTAAAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCAAATCTACGGCATCTTGAGTTTCTTCAGGTTTATGTTGGAGACAAGCTGCATTTCAATGCTGAGAGGTTCCAAAATCTGAAGGTTTTAGGCCTTGATGACATAGATGAACTGAAATCCATGGTAATTGAGGAGGGAGCAATGGCAGGCCTTAAGAAGCTGATCATCCAGAGATGTGACTCATTGAAGCAGGTACCATTAGGCATTGAACACCTGAGTAAGCTAAAGTCGATCGAGTTTTTCGACATGCCTGAAGAACTGATTTCAGGTCTGCGTCCAAATGGAGGGAAAGATCATTGGAGAGTGCAACATGTACCAGTTGTTTACTCCACATACTGGAGGGATGGTGGTTGGGATGTGTATTCAATAGATACTTTTGGAGAGAGAGAAACTGATTCTAGTGCTGTAATGAGAAGTCTAGAGCTTCGAACTCTTTGGAAG 2727 0.4309 MAESPVSFLLDKLTSLLQEEVNLQRGVRDDVQHIKGELERHKAILRVADALEDKDHELQVWIKRVRDIAHEMEDAIDEFNVRLVDQHMHGRNSSLTHKIVFTWKTLQARRQIGSHIQEIKSRLDVISSGRPSMHGIGSRSSQRLSSRLDSQGDALLLEEADLVGIETPKKQISDLLFKDEANRDVIAIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVIVSQSFKLEELLRDLVQQLYNVIGKPAPEAVGQMRSDKLKEMIKNLLQRSRYLIVLDDVWHVNVWDSVKYALPNNGRGSRVMLTTRKRNVAMSSSAEFGKVYNLEFLSEHEAWSLFCRKTFQGNSCPSHLEEVCWNILKLCGGLPLAIVAISGALATRDRTNIEEWQMVCRSFGAEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSMFPEFHAIEHMRLIRLWIAEGFVVGEDGKTLEEVADSYLKELLNRSLLQVVQKTSDGRMKTCRMHDLIREIVTLKSKNQNFATIAKEQDITWPEKVRRLSVINTMHNIQQNKTFQLRSLLMFALSDANHVFSLHAVFSTGYRLLRVLDLQDAPLQVFPDEVVNLYLLKFLSLKNTKVKSIPGSIKKLQHLETLDLKHTNVTELPVEIVELQRLRHLLVYRYEIESYAYFHSKYGFKVSAPIGRMLSLQKLCFIEVDQGSKALMVELGKLTQLRRLGIRKMRREDGAALCSSIEKMINLRSLSITAINEDEIIDIHNISNPPQLKEDPLVYLQDLPNLRHLEFLQVYVGDKLHFNAERFQNLKVLGLDDIDELKSMVIEEGAMAGLKKLIIQRCDSLKQVPLGIEHLSKLKSIEFFDMPEELISGLRPNGGKDHWRVQHVPVVYSTYWRDGGWDVYSIDTFGERETDSSAVMRSLELRTLWK 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90663g00030 909 CDD RX-CC_like 2 128 IPR038005 -
Stsc90663g00030 909 Gene3D - 151 320 IPR027417 -
Stsc90663g00030 909 SUPERFAMILY L domain-like 491 849 - -
Stsc90663g00030 909 Gene3D - 325 412 IPR042197 -
Stsc90663g00030 909 Gene3D - 5 113 - -
Stsc90663g00030 909 PANTHER DISEASE RESISTANCE PROTEIN RP 32 824 IPR044974 GO:0006952
Stsc90663g00030 909 Gene3D - 413 504 IPR036388 -
Stsc90663g00030 909 Pfam NB-ARC domain 166 414 IPR002182 GO:0043531
Stsc90663g00030 909 Pfam Rx N-terminal domain 6 93 IPR041118 -
Stsc90663g00030 909 PRINTS Disease resistance protein signature 185 200 - -
Stsc90663g00030 909 PRINTS Disease resistance protein signature 265 279 - -
Stsc90663g00030 909 PRINTS Disease resistance protein signature 613 629 - -
Stsc90663g00030 909 PRINTS Disease resistance protein signature 360 374 - -
Stsc90663g00030 909 FunFam Probable disease resistance protein At1g63360 413 502 - -
Stsc90663g00030 909 Gene3D Ribonuclease Inhibitor 554 854 IPR032675 -
Stsc90663g00030 909 FunFam Probable disease resistance protein At1g61300 152 317 - -
Stsc90663g00030 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90663g00030 Stsc-Chr90663 177696 180517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90663g00030 163 626 WRKY Transcription Factor Family AT5G45050 22.699 1.36e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90663g00030 K13457 - gmx:100305458 1407.89