Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90663g00020 ATGGGAAGTAGTTATGGTGAGGATGGCGGAGGAGAAGGTGGTTATGGGATGGTGATGAGTATGACAAGAGAGCCTAAGCCTCGGTTGAGATGGACAGCTGATCTTCATGATCGCTTTGTGGATGCTGTCACCAAGCTTGGTGGCCCCGACAAAGCAACTCCCAAATCTGTTCTGAGGATAATGGGTTTGAAAGGCTTAACATTGTATCATTTGAAGAGTCACTTACAGAAGTATAGACTTGGACAGCAAGCAAGAAAACAAAATGAAGAACATCACAAAGAGAATAATAGATATTCATATGTGAATTTCAGCAATAGCTCTTCAGGGTTCAGCACCAGTTTCAGAGTTGATAATGAAAGAGGAGAAATCCCAATAACAGAGGCATTGAGGCAACAAATTGAAGTCCAAAAGAGATTGGAAGAACAGCTAGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTACAAGCTGTGTTAGAGAAAGCTCAGAGGACACTTTCCATGGAACGTTCAGGCAATAATCTAGAAGCATCAAGAGCTCAATTGACCGAATTCAACTCAGCCTTGTCCAATTTCATGGAAAATATGAACAACAAAGATAGCAAAGAAAGCATATTAGATTTCCCTAATTACCATGAAGTAGTAGAGAGAGAAGAAAATATTGATAAGAAGCCTAAGATTGAAGAGGGTTCTATTCAATTTGGCTTAAACATCAAAGGTAGCTATGATCTTGTATCTGCAAGTGATGGTGGATCTGAAATTGAAGCCAAAATGCTTTCTTCATATAGGCTATGA 810 0.3963 MGSSYGEDGGGEGGYGMVMSMTREPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQARKQNEEHHKENNRYSYVNFSNSSSGFSTSFRVDNERGEIPITEALRQQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSMERSGNNLEASRAQLTEFNSALSNFMENMNNKDSKESILDFPNYHEVVEREENIDKKPKIEEGSIQFGLNIKGSYDLVSASDGGSEIEAKMLSSYRL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90663g00020 269 Pfam Myb-like DNA-binding domain 29 79 IPR001005 -
Stsc90663g00020 269 SUPERFAMILY Homeodomain-like 25 83 IPR009057 -
Stsc90663g00020 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 26 81 IPR006447 GO:0003677
Stsc90663g00020 269 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
Stsc90663g00020 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 83 IPR017930 -
Stsc90663g00020 269 FunFam Myb family transcription factor 25 83 - -
Stsc90663g00020 269 Coils Coil 126 156 - -
Stsc90663g00020 269 Gene3D - 25 83 - -
Stsc90663g00020 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 210 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90663g00020 Stsc-Chr90663 104933 106884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90663g00020 18 246 G2-like Transcription Factor Family AT3G24120 44.583 3.20e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc90663g00020 Myb_DNA-binding 6.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90663g00020 - - gmx:100810146 353.214